RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 CNTLNQ9NXG0 1405 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 K7EQZ3 153 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 GNGT1P63211 74 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 HMGN3Q15651 99 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 TEX14Q8IWB6 1497 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 PRDM15P57071 1507 aaPredicted RBP0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 H0Y9P7 68 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 M0R143 59 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 COL5A1-AS1Q5SY13 56 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 ZNF720Q7Z2F6 126 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 C6orf201Q7Z4U5 140 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 CELSR1Q9NYQ6 3014 aa0.07□□□□□ -2.4
RNU1-39P-201ENST00000383897 PLEKHH2Q8IVE3 1493 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 A0A087WVE0 104 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 UQCRHLA0A096LP55 91 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 LOC730098B7Z3J9 87 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 S100A8P05109 93 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 FXYD6Q9H0Q3 95 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 CHD6Q8TD26 2715 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 BTAF1O14981 1849 aa0.06□□□□□ -2.4
RNU1-39P-201ENST00000383897 CC2D2AQ9P2K1 1620 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 TOPAZ1Q8N9V7 1692 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 RAPGEF2Q9Y4G8 1499 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 MT-ATP8P03928 68 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 LCN9Q8WX39 176 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 CRIPTQ9P021 101 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 ANKRD36BQ8N2N9 1353 aa0.05□□□□□ -2.4
RNU1-39P-201ENST00000383897 XRN1Q8IZH2 1706 aaKnown RBP0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 H7BZZ5 65 aa0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 ARMS2P0C7Q2 107 aa0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 ASIPP42127 132 aa0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 DEFB105AQ8NG35 78 aa0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 EDC4Q6P2E9 1401 aaKnown RBP0.04□□□□□ -2.4
RNU1-39P-201ENST00000383897 GVINP1Q7Z2Y8 2422 aa0.03□□□□□ -2.4
RNU1-39P-201ENST00000383897 I3L3M4 83 aa0.03□□□□□ -2.4
RNU1-39P-201ENST00000383897 FAUP35544 74 aaKnown RBP0.03□□□□□ -2.4
RNU1-39P-201ENST00000383897 VWFP04275 2813 aa0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 PKD1L1Q8TDX9 2849 aa0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 SPTA1P02549 2419 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 SPRR2DP22532 72 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 SMIM11AP58511 58 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 ETDBQ3ZM63 59 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 DEFB107AQ8IZN7 70 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 VPS8Q8N3P4 1428 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 NLRP1Q9C000 1473 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 SCN7AQ01118 1682 aa0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 CPSF4LA6NMK7 179 aaKnown RBP0.01□□□□□ -2.41
RNU1-39P-201ENST00000383897 KIAA0556O60303 1618 aa0.01□□□□□ -2.41
RNU1-39P-201ENST00000383897 NUP188Q5SRE5 1749 aa0.01□□□□□ -2.41
RNU1-39P-201ENST00000383897 FLNAP21333 2647 aaKnown RBP0□□□□□ -2.41
RNU1-39P-201ENST00000383897 TRBV7-7A0A0K0K1E9 115 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 D6R8Y8 96 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 CHD1O14646 1710 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 GYPAP02724 150 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 PDCD11Q14690 1871 aaKnown RBP0□□□□□ -2.41
RNU1-39P-201ENST00000383897 NCMAPQ5T1S8 102 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 MUSTN1Q8IVN3 82 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 ABCA3Q99758 1704 aa0□□□□□ -2.41
RNU1-39P-201ENST00000383897 URB1O60287 2271 aaKnown RBP-0.01□□□□□ -2.41
RNU1-39P-201ENST00000383897 CSMD3Q7Z407 3707 aa-0.01□□□□□ -2.41
RNU1-39P-201ENST00000383897 COL4A6Q14031 1691 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 EPRSP07814 1512 aaKnown RBP-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 IQSEC2Q5JU85 1478 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 CCL22O00626 93 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 LEPROTL1O95214 131 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 PKIAP61925 76 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 PSENENQ9NZ42 101 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 ATRQ13535 2644 aa-0.02□□□□□ -2.41
RNU1-39P-201ENST00000383897 GPR98Q8WXG9 6306 aa-0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 TSC2P49815 1807 aa-0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 APLNQ9ULZ1 77 aa-0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 CSPG4Q6UVK1 2322 aa-0.03□□□□□ -2.41
RNU1-39P-201ENST00000383897 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 SPTY2D1-AS1A0A0U1RR47 76 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 PRM1P04553 51 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 LRRC37AA6NMS7 1700 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 SSPOA2VEC9 5147 aa-0.04□□□□□ -2.42
RNU1-39P-201ENST00000383897 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 TNXBP22105 4242 aa-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 CLIP1P30622 1438 aa-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 ZFHX3Q15911 3703 aa-0.05□□□□□ -2.42
RNU1-39P-201ENST00000383897 CUX1P39880 1505 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 F8WEM9 126 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 Q9H521 79 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 FANCAO15360 1455 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 NKTRP30414 1462 aaKnown RBP-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 DCHS2Q6V1P9 2916 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 BSNQ9UPA5 3926 aa-0.06□□□□□ -2.42
RNU1-39P-201ENST00000383897 MAP1BP46821 2468 aaKnown RBP-0.07□□□□□ -2.42
RNU1-39P-201ENST00000383897 DNAJC13O75165 2243 aa-0.07□□□□□ -2.42
RNU1-39P-201ENST00000383897 MYCBP2O75592 4640 aa-0.07□□□□□ -2.42
RNU1-39P-201ENST00000383897 HSPG2P98160 4391 aa-0.07□□□□□ -2.42
RNU1-39P-201ENST00000383897 M0R2T5 61 aa-0.07□□□□□ -2.42
RNU1-39P-201ENST00000383897 PEA15Q15121 130 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms