RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TMEM141Q96I45 108 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 LINC01556Q5JQF7 62 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 CASC10Q5T4H9 136 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 Q6ZSN1 163 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 Q8N2B8 174 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 LRBAP50851 2863 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 KRTAP1-1Q07627 177 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 PRO0461Q9UI25 63 aa4.71□□□□□ -1.66
NEDD9-202ENST00000379446 HAMPP81172 84 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 CELA1Q9UNI1 258 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 XAGE1AQ9HD64 81 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 IGKV3D-7A0A0C4DH55 119 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 TRBV6-4A0A1B0GX49 114 aa4.7□□□□□ -1.66
NEDD9-202ENST00000379446 LINC00315P59091 139 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 USP17L23D6RBM5 183 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 REG3GQ6UW15 175 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 A0A0J9YXV3 536 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 COX6A2Q02221 97 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 EGFEM1PQ0D2K5 195 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 NRACQ8N912 160 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
NEDD9-202ENST00000379446 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
NEDD9-202ENST00000379446 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
NEDD9-202ENST00000379446 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
NEDD9-202ENST00000379446 SMG1Q96Q15 3661 aaKnown RBP4.68□□□□□ -1.66
NEDD9-202ENST00000379446 Q6Q795 121 aa4.68□□□□□ -1.66
NEDD9-202ENST00000379446 ZFAND2AQ8N6M9 145 aa4.68□□□□□ -1.66
NEDD9-202ENST00000379446 hADV29S1A0JD25 119 aa4.68□□□□□ -1.66
NEDD9-202ENST00000379446 FLG2Q5D862 2391 aaPredicted RBP4.68□□□□□ -1.66
NEDD9-202ENST00000379446 DIRC1Q969H9 104 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 PLAC8L1A1L4L8 177 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 A8MZ25 164 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 DCANP1Q8TF63 244 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 CNFNQ9BYD5 112 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 ZZEF1O43149 2961 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 HRCT1Q6UXD1 115 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
NEDD9-202ENST00000379446 TINCRA0A1B0GVN0 87 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 TOMM6Q96B49 74 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 TRIAP1O43715 76 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 TRACP01848 142 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 LINC00476Q8WZB0 136 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 ZNF580Q9UK33 172 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 NCR3O14931 201 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 RTL8CO15255 209 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 RPL28P46779 137 aaKnown RBP4.66□□□□□ -1.66
NEDD9-202ENST00000379446 KRTAP10-3P60369 221 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
NEDD9-202ENST00000379446 TRBV10-2A0A0K0K1G8 114 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 A0A1B0GX51 115 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 J3KT08 172 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 IGKV2-28A0A075B6P5 120 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 A0A096LNT2 108 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 IGKV2D-28P01615 120 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 COX8CQ7Z4L0 72 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 NEXN-AS1Q8NBZ9 246 aa4.65□□□□□ -1.66
NEDD9-202ENST00000379446 IGLV4-69A0A075B6H9 119 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 LYPD5Q6UWN5 251 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 RNASE3P12724 160 aaKnown RBP4.65□□□□□ -1.67
NEDD9-202ENST00000379446 RPL37AP61513 92 aaKnown RBP4.65□□□□□ -1.67
NEDD9-202ENST00000379446 SDIM1Q6ZPB5 146 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 DSCR8Q96T75 97 aa4.65□□□□□ -1.67
NEDD9-202ENST00000379446 ESRGQ1W209 222 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 COX7B2Q8TF08 81 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 CXCL5P42830 114 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 KRTAP21-3Q3LHN1 58 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 RELNP78509 3460 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
NEDD9-202ENST00000379446 CSDC2Q9Y534 153 aaKnown RBP4.64□□□□□ -1.67
NEDD9-202ENST00000379446 RPL37AP8A6NKH3 93 aa4.63□□□□□ -1.67
NEDD9-202ENST00000379446 BAALC-AS2P0C853 105 aa4.63□□□□□ -1.67
NEDD9-202ENST00000379446 ZNF706Q9Y5V0 76 aaPredicted RBP4.63□□□□□ -1.67
NEDD9-202ENST00000379446 ITPR1Q14643 2758 aa4.63□□□□□ -1.67
NEDD9-202ENST00000379446 NDUFB1O75438 58 aa4.63□□□□□ -1.67
NEDD9-202ENST00000379446 A0A0U1RQV1 116 aa4.62□□□□□ -1.67
NEDD9-202ENST00000379446 C3orf22Q8N5N4 141 aa4.62□□□□□ -1.67
NEDD9-202ENST00000379446 H7C423 109 aa4.62□□□□□ -1.67
NEDD9-202ENST00000379446 A0A087WVE0 104 aa4.61□□□□□ -1.67
NEDD9-202ENST00000379446 ZNF575Q86XF7 245 aa4.61□□□□□ -1.67
NEDD9-202ENST00000379446 A0A0J9YXY3 114 aa4.61□□□□□ -1.67
NEDD9-202ENST00000379446 LCE6AA0A183 80 aa4.61□□□□□ -1.67
NEDD9-202ENST00000379446 ASH1LQ9NR48 2969 aaKnown RBP4.6□□□□□ -1.67
NEDD9-202ENST00000379446 INAFM2P0DMQ5 153 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 MED14OSP0DP75 135 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 UQCRQO14949 82 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.671e-8■■■□□ 15.2
NEDD9-202ENST00000379446 TM2D3Q9BRN9 247 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 H0Y9J4 135 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 C14orf132Q9NPU4 83 aa4.6□□□□□ -1.67
NEDD9-202ENST00000379446 SOCS3O14543 225 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms