RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NCR3O14931 201 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 C18orf65Q6ZTR6 163 aa8.47□□□□□ -1.05
RTN3-203ENST00000341307 RBM3P98179 157 aaKnown RBP8.47□□□□□ -1.05
RTN3-203ENST00000341307 PMAIP1Q13794 54 aa8.47□□□□□ -1.05
RTN3-203ENST00000341307 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
RTN3-203ENST00000341307 TRAV7A0A075B6U4 112 aa8.46□□□□□ -1.05
RTN3-203ENST00000341307 DEFB136Q30KP8 78 aa8.46□□□□□ -1.05
RTN3-203ENST00000341307 ATRQ13535 2644 aa8.46□□□□□ -1.06
RTN3-203ENST00000341307 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
RTN3-203ENST00000341307 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
RTN3-203ENST00000341307 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
RTN3-203ENST00000341307 Q9H8V8 135 aa8.44□□□□□ -1.06
RTN3-203ENST00000341307 C2CD3Q4AC94 2353 aa8.44□□□□□ -1.06
RTN3-203ENST00000341307 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
RTN3-203ENST00000341307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.43□□□□□ -1.06
RTN3-203ENST00000341307 MPLKIPQ8TAP9 179 aa8.43□□□□□ -1.06
RTN3-203ENST00000341307 K7EMT4 169 aa8.42□□□□□ -1.06
RTN3-203ENST00000341307 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
RTN3-203ENST00000341307 RETNQ9HD89 108 aa8.42□□□□□ -1.06
RTN3-203ENST00000341307 SLURP1P55000 103 aa8.42□□□□□ -1.06
RTN3-203ENST00000341307 KHDC1LQ5JSQ8 128 aa8.42□□□□□ -1.06
RTN3-203ENST00000341307 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
RTN3-203ENST00000341307 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 TMEM89A2RUT3 159 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 C11orf44Q8N8P7 122 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 UBE2E2Q96LR5 201 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
RTN3-203ENST00000341307 BCE1O60756 84 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 MIR7-3HGQ8N6C7 128 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 ESM1Q9NQ30 184 aa8.41□□□□□ -1.06
RTN3-203ENST00000341307 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
RTN3-203ENST00000341307 PRR15Q8IV56 129 aa8.4□□□□□ -1.06
RTN3-203ENST00000341307 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
RTN3-203ENST00000341307 DNAJC9-AS1A6NH13 148 aa8.4□□□□□ -1.07
RTN3-203ENST00000341307 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.07
RTN3-203ENST00000341307 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 TRAV10A0A0B4J240 114 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 Q6ZRU5 148 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 IGLV5-45A0A087WSX0 123 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 SLPIP03973 132 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
RTN3-203ENST00000341307 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
RTN3-203ENST00000341307 LECT2O14960 151 aa8.38□□□□□ -1.07
RTN3-203ENST00000341307 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
RTN3-203ENST00000341307 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
RTN3-203ENST00000341307 COX6A2Q02221 97 aa8.38□□□□□ -1.07
RTN3-203ENST00000341307 SMIM11BQ8TCY0 68 aa8.38□□□□□ -1.07
RTN3-203ENST00000341307 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 IBA57-AS1B1ANH7 110 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 KLLNB2CW77 178 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 SORL1Q92673 2214 aa8.37□□□□□ -1.07
RTN3-203ENST00000341307 PLAC8L1A1L4L8 177 aa8.36□□□□□ -1.07
RTN3-203ENST00000341307 CRPP02741 224 aa8.36□□□□□ -1.07
RTN3-203ENST00000341307 CD164Q04900 197 aa8.36□□□□□ -1.07
RTN3-203ENST00000341307 K7EQG2 157 aa8.36□□□□□ -1.07
RTN3-203ENST00000341307 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
RTN3-203ENST00000341307 NDUFC1O43677 76 aa8.35□□□□□ -1.07
RTN3-203ENST00000341307 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
RTN3-203ENST00000341307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
RTN3-203ENST00000341307 H0YGX0 51 aa8.34□□□□□ -1.07
RTN3-203ENST00000341307 PAX4O43316 350 aa8.34□□□□□ -1.07
RTN3-203ENST00000341307 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
RTN3-203ENST00000341307 C4orf3Q8WVX3 66 aa8.34□□□□□ -1.07
RTN3-203ENST00000341307 DNHD1Q96M86 4753 aa8.34□□□□□ -1.08
RTN3-203ENST00000341307 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
RTN3-203ENST00000341307 SPINK13Q1W4C9 94 aa8.33□□□□□ -1.08
RTN3-203ENST00000341307 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
RTN3-203ENST00000341307 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
RTN3-203ENST00000341307 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
RTN3-203ENST00000341307 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 MIFP14174 115 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 TM2D3Q9BRN9 247 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 Q9UF83 564 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
RTN3-203ENST00000341307 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
RTN3-203ENST00000341307 PROK1P58294 105 aa8.31□□□□□ -1.08
RTN3-203ENST00000341307 Q6ZTI0 123 aa8.31□□□□□ -1.08
RTN3-203ENST00000341307 DEFB131AP59861 70 aa8.31□□□□□ -1.08
RTN3-203ENST00000341307 A0A087WZ39 114 aa8.3□□□□□ -1.08
RTN3-203ENST00000341307 ESRGQ1W209 222 aa8.3□□□□□ -1.08
RTN3-203ENST00000341307 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
RTN3-203ENST00000341307 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
RTN3-203ENST00000341307 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
RTN3-203ENST00000341307 WNK1Q9H4A3 2382 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 IGHV3OR16-12A0A075B7B8 117 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 ZNF561-AS1K7EIQ3 104 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 PRM2P04554 102 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 HTN1P15515 57 aa8.29□□□□□ -1.08
RTN3-203ENST00000341307 C6orf223Q8N319 242 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms