RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 COA5Q86WW8 74 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 LINC00476Q8WZB0 136 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 U3KQA8 63 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 Q8IZM0 81 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 ABCA4P78363 2273 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 HTN1P15515 57 aa5.76□□□□□ -1.49
TDP1-201ENST00000335725 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
TDP1-201ENST00000335725 G3V318 75 aa5.75□□□□□ -1.49
TDP1-201ENST00000335725 IGHV4-59P01825 116 aa5.75□□□□□ -1.49
TDP1-201ENST00000335725 KLK12Q9UKR0 248 aa5.75□□□□□ -1.49
TDP1-201ENST00000335725 PLAC8Q9NZF1 115 aa5.74□□□□□ -1.49
TDP1-201ENST00000335725 NBEAQ8NFP9 2946 aa5.74□□□□□ -1.49
TDP1-201ENST00000335725 IGHV4-30-4P0DP06 118 aa5.74□□□□□ -1.49
TDP1-201ENST00000335725 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
TDP1-201ENST00000335725 USMG5Q96IX5 58 aa5.74□□□□□ -1.49
TDP1-201ENST00000335725 FBXL19-AS1Q494R0 122 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 Q8NAQ8 132 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 MGAQ8IWI9 3026 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 SPINK7P58062 85 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 ICE1Q9Y2F5 2266 aa5.73□□□□□ -1.49
TDP1-201ENST00000335725 B4DSR2 109 aa5.72□□□□□ -1.49
TDP1-201ENST00000335725 DEFB112Q30KQ8 113 aa5.72□□□□□ -1.49
TDP1-201ENST00000335725 IGHV3-11P01762 117 aa5.72□□□□□ -1.49
TDP1-201ENST00000335725 ODF3L2Q3SX64 289 aa5.71□□□□□ -1.49
TDP1-201ENST00000335725 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.49
TDP1-201ENST00000335725 IGLV6-57P01721 117 aa5.71□□□□□ -1.5
TDP1-201ENST00000335725 TRGV4A0A0C4DH28 118 aa5.71□□□□□ -1.5
TDP1-201ENST00000335725 A8MTW9 85 aa5.71□□□□□ -1.5
TDP1-201ENST00000335725 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
TDP1-201ENST00000335725 H3BUA1 57 aa5.7□□□□□ -1.5
TDP1-201ENST00000335725 IGLV1-51P01701 117 aa5.7□□□□□ -1.5
TDP1-201ENST00000335725 ZNF702PQ9H963 129 aa5.7□□□□□ -1.5
TDP1-201ENST00000335725 ZFP36P26651 326 aaKnown RBP5.69□□□□□ -1.5
TDP1-201ENST00000335725 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
TDP1-201ENST00000335725 H0Y9P7 68 aa5.69□□□□□ -1.5
TDP1-201ENST00000335725 DSCR9P59020 149 aa5.68□□□□□ -1.5
TDP1-201ENST00000335725 CACNA1GO43497 2377 aa5.68□□□□□ -1.5
TDP1-201ENST00000335725 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
TDP1-201ENST00000335725 RTL8CO15255 209 aa5.68□□□□□ -1.5
TDP1-201ENST00000335725 MED13LQ71F56 2210 aa5.67□□□□□ -1.5
TDP1-201ENST00000335725 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
TDP1-201ENST00000335725 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
TDP1-201ENST00000335725 IGHV4-61A0A0C4DH41 118 aa5.67□□□□□ -1.5
TDP1-201ENST00000335725 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 LINC01565O15544 149 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 CEP250Q9BV73 2442 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 DNAJC9-AS1A6NH13 148 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 VCANP13611 3396 aa5.66□□□□□ -1.5
TDP1-201ENST00000335725 MKI67P46013 3256 aaKnown RBP5.66□□□□□ -1.5
TDP1-201ENST00000335725 INSP01308 110 aa5.65□□□□□ -1.51
TDP1-201ENST00000335725 C5orf56Q8N8D9 126 aa5.65□□□□□ -1.51
TDP1-201ENST00000335725 K7EQZ3 153 aa5.64□□□□□ -1.51
TDP1-201ENST00000335725 DSCR10P59022 87 aa5.64□□□□□ -1.51
TDP1-201ENST00000335725 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
TDP1-201ENST00000335725 KPRPQ5T749 579 aaPredicted RBP5.64□□□□□ -1.51
TDP1-201ENST00000335725 ARRDC1-AS1Q9H2J1 176 aa5.64□□□□□ -1.51
TDP1-201ENST00000335725 PRO3102Q9H379 93 aa5.64□□□□□ -1.51
TDP1-201ENST00000335725 X6R8D5 127 aa5.63□□□□□ -1.51
TDP1-201ENST00000335725 C11orf71Q6IPW1 123 aa5.63□□□□□ -1.51
TDP1-201ENST00000335725 LAMA2P24043 3122 aaKnown RBP5.63□□□□□ -1.51
TDP1-201ENST00000335725 IGLV5-48A0A075B6I7 105 aa5.63□□□□□ -1.51
TDP1-201ENST00000335725 FRYQ5TBA9 3013 aa5.63□□□□□ -1.51
TDP1-201ENST00000335725 IGKV2D-24A0A075B6R9 120 aa5.62□□□□□ -1.51
TDP1-201ENST00000335725 TRGV1A0A0A0MS02 117 aa5.62□□□□□ -1.51
TDP1-201ENST00000335725 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
TDP1-201ENST00000335725 SPTBN1Q01082 2364 aaKnown RBP5.61□□□□□ -1.51
TDP1-201ENST00000335725 LYNX1G3V0Z9 82 aa5.61□□□□□ -1.51
TDP1-201ENST00000335725 LYNX1P0DP58 116 aa5.61□□□□□ -1.51
TDP1-201ENST00000335725 ROMO1P60602 79 aa5.61□□□□□ -1.51
TDP1-201ENST00000335725 Q8NBF4 154 aa5.6□□□□□ -1.51
TDP1-201ENST00000335725 Q8NDZ9 215 aa5.6□□□□□ -1.51
TDP1-201ENST00000335725 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
TDP1-201ENST00000335725 C5orf42Q9H799 3197 aa5.6□□□□□ -1.51
TDP1-201ENST00000335725 WFDC13Q8IUB5 93 aa5.59□□□□□ -1.51
TDP1-201ENST00000335725 TECTAO75443 2155 aa5.59□□□□□ -1.51
TDP1-201ENST00000335725 Q6ZR54 194 aa5.58□□□□□ -1.52
TDP1-201ENST00000335725 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
TDP1-201ENST00000335725 BRCA2P51587 3418 aa5.58□□□□□ -1.52
TDP1-201ENST00000335725 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
TDP1-201ENST00000335725 ZZEF1O43149 2961 aa5.58□□□□□ -1.52
TDP1-201ENST00000335725 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
TDP1-201ENST00000335725 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
TDP1-201ENST00000335725 FRYLO94915 3013 aa5.57□□□□□ -1.52
TDP1-201ENST00000335725 DEFB131AP59861 70 aa5.57□□□□□ -1.52
TDP1-201ENST00000335725 REG3AQ06141 175 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 XAGE1AQ9HD64 81 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 CFAP47Q6ZTR5 3102 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 LAMA3Q16787 3333 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 PKDREJQ9NTG1 2253 aa5.56□□□□□ -1.52
TDP1-201ENST00000335725 WDFY4Q6ZS81 3184 aa5.55□□□□□ -1.52
TDP1-201ENST00000335725 A0A0J9YWU9 116 aa5.55□□□□□ -1.52
TDP1-201ENST00000335725 A0A1B0GUV1 79 aa5.55□□□□□ -1.52
TDP1-201ENST00000335725 MAP6D1Q9H9H5 199 aa5.55□□□□□ -1.52
TDP1-201ENST00000335725 SDK1Q7Z5N4 2213 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms