RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 VAMP3Q15836 100 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 ESRGQ1W209 222 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 Q8N3U1 123 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 C11orf45Q8TAV5 145 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 ATRQ13535 2644 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 SRSF9Q13242 221 aaKnown RBP eCLIP4.82□□□□□ -1.64
NPHP1-201ENST00000316534 LINC00269Q8N2A0 174 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 B9D2Q9BPU9 175 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 FABP2P12104 132 aa4.82□□□□□ -1.64
NPHP1-201ENST00000316534 CHCHD10Q8WYQ3 142 aaPredicted RBP4.82□□□□□ -1.64
NPHP1-201ENST00000316534 LYSTQ99698 3801 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 COL7A1Q02388 2944 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 NDUFC2O95298 119 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 NANOS2P60321 138 aaKnown RBP4.81□□□□□ -1.64
NPHP1-201ENST00000316534 PGPEP1Q9NXJ5 209 aa4.81□□□□□ -1.64
NPHP1-201ENST00000316534 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 CIRBPQ14011 172 aaKnown RBP4.8□□□□□ -1.64
NPHP1-201ENST00000316534 WFDC2Q14508 124 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 SETD2Q9BYW2 2564 aaPredicted RBP4.8□□□□□ -1.64
NPHP1-201ENST00000316534 IGKV2-28A0A075B6P5 120 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 DEFB131BA0A096LNP1 70 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 IGKV2D-28P01615 120 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 PRSS2P07478 247 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 NOTCH3Q9UM47 2321 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 COX7A2LO14548 114 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 NTN5Q8WTR8 489 aaPredicted RBP4.8□□□□□ -1.64
NPHP1-201ENST00000316534 RAB37Q96AX2 223 aa4.8□□□□□ -1.64
NPHP1-201ENST00000316534 JMJD1CQ15652 2540 aa4.79□□□□□ -1.64
NPHP1-201ENST00000316534 WFDC10BQ8IUB3 73 aa4.79□□□□□ -1.64
NPHP1-201ENST00000316534 ERG28Q9UKR5 140 aa4.79□□□□□ -1.64
NPHP1-201ENST00000316534 STARD9Q9P2P6 4700 aa4.79□□□□□ -1.64
NPHP1-201ENST00000316534 FRAS1Q86XX4 4008 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 DNHD1Q96M86 4753 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 C15orf56Q8N910 161 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 C2orf48Q96LS8 159 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 TCL1BO95988 128 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 ANGP03950 147 aaKnown RBP4.78□□□□□ -1.64
NPHP1-201ENST00000316534 RPL28P46779 137 aaKnown RBP4.78□□□□□ -1.64
NPHP1-201ENST00000316534 RNF151Q2KHN1 245 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 Q6Q795 121 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 OBSCN-AS1Q96MR7 158 aa4.78□□□□□ -1.64
NPHP1-201ENST00000316534 TMEM262E9PQX1 116 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
NPHP1-201ENST00000316534 C5orf38Q86SI9 138 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 SIGMAR1Q99720 223 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 TENM3Q9P273 2699 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 TRIAP1O43715 76 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 XCL1P47992 114 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 CCL18P55774 89 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 DNAH17Q9UFH2 4485 aa4.77□□□□□ -1.65
NPHP1-201ENST00000316534 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 NAA38Q9BRA0 125 aaKnown RBP4.76□□□□□ -1.65
NPHP1-201ENST00000316534 APLNQ9ULZ1 77 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 TLX1NBP0CAT3 122 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 MIR7-3HGQ8N6C7 128 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 LINC00167Q96N53 147 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 LST1O00453 97 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 APOMO95445 188 aa4.76□□□□□ -1.65
NPHP1-201ENST00000316534 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
NPHP1-201ENST00000316534 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
NPHP1-201ENST00000316534 TRAV13-2A0A0B4J235 113 aa4.75□□□□□ -1.65
NPHP1-201ENST00000316534 C2orf82Q6UX34 121 aa4.75□□□□□ -1.65
NPHP1-201ENST00000316534 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
NPHP1-201ENST00000316534 FLNBO75369 2602 aaKnown RBP4.74□□□□□ -1.65
NPHP1-201ENST00000316534 DAND5Q8N907 189 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 TRBV10-2A0A0K0K1G8 114 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 HTN3P15516 51 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 Q8NDZ9 215 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 C6orf48Q9UBA6 75 aa4.74□□□□□ -1.65
NPHP1-201ENST00000316534 C6orf226Q5I0X4 101 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 C10orf25Q5T742 122 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 XGP55808 180 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 CLPSL2Q6UWE3 100 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 STAB1Q9NY15 2570 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 SPAG11BQ08648 103 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 SND1-IT1Q9HBX3 110 aa4.73□□□□□ -1.65
NPHP1-201ENST00000316534 IGLV6-57P01721 117 aa4.72□□□□□ -1.65
NPHP1-201ENST00000316534 TRACP01848 142 aa4.72□□□□□ -1.65
NPHP1-201ENST00000316534 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
NPHP1-201ENST00000316534 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
NPHP1-201ENST00000316534 TRBV7-7A0A0K0K1E9 115 aa4.72□□□□□ -1.65
NPHP1-201ENST00000316534 PRB2P02812 416 aaPredicted RBP4.72□□□□□ -1.65
NPHP1-201ENST00000316534 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
NPHP1-201ENST00000316534 A0A1B0GX51 115 aa4.71□□□□□ -1.65
NPHP1-201ENST00000316534 H3BT86 120 aa4.71□□□□□ -1.66
NPHP1-201ENST00000316534 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
NPHP1-201ENST00000316534 C6orf223Q8N319 242 aa4.71□□□□□ -1.66
NPHP1-201ENST00000316534 IGKV3OR2-268A0A0C4DH90 116 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms