RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 TSHBP01222 138 aa9.65□□□□□ -0.86
COLGALT1-201ENST00000252599 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
COLGALT1-201ENST00000252599 SUMO4Q6EEV6 95 aa9.65□□□□□ -0.86
COLGALT1-201ENST00000252599 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
COLGALT1-201ENST00000252599 IGHV7-81A0A0B4J1V7 117 aa9.64□□□□□ -0.87
COLGALT1-201ENST00000252599 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
COLGALT1-201ENST00000252599 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
COLGALT1-201ENST00000252599 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
COLGALT1-201ENST00000252599 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
COLGALT1-201ENST00000252599 CRYBG3Q68DQ2 2970 aa9.63□□□□□ -0.87
COLGALT1-201ENST00000252599 A8MU10 97 aa9.63□□□□□ -0.87
COLGALT1-201ENST00000252599 LINC01547P58512 204 aaPredicted RBP9.63□□□□□ -0.87
COLGALT1-201ENST00000252599 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
COLGALT1-201ENST00000252599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 TEP1Q99973 2627 aaKnown RBP9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 HELZ2Q9BYK8 2649 aaKnown RBP9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 IGLV11-55A0A075B6I3 123 aa9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
COLGALT1-201ENST00000252599 AMELXQ99217 191 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 RNF5Q99942 180 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 FSTL3O95633 263 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 Q8N9L7 120 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 FLNAP21333 2647 aaKnown RBP9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
COLGALT1-201ENST00000252599 A0A0J9YX75 114 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 LINC01356Q8N9X3 169 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 IGLV4-3A0A075B6K6 122 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
COLGALT1-201ENST00000252599 C20orf203Q8NBC4 194 aa9.59□□□□□ -0.87
COLGALT1-201ENST00000252599 IGHV4-59P01825 116 aa9.59□□□□□ -0.87
COLGALT1-201ENST00000252599 Q8N9W7 124 aa9.59□□□□□ -0.87
COLGALT1-201ENST00000252599 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
COLGALT1-201ENST00000252599 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
COLGALT1-201ENST00000252599 ATRQ13535 2644 aa9.58□□□□□ -0.88
COLGALT1-201ENST00000252599 RHPN1-AS1Q9BWJ2 59 aa9.58□□□□□ -0.88
COLGALT1-201ENST00000252599 Q6ZRP5 223 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 TRBV10-3A0A0K0K1G6 114 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 MSMBP08118 114 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 MINOS1Q5TGZ0 78 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 MINOS1-NBL1R4GNA1 71 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 ZANQ9Y493 2812 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
COLGALT1-201ENST00000252599 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 CXCL6P80162 114 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 DCHS2Q6V1P9 2916 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 C10orf99Q6UWK7 81 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
COLGALT1-201ENST00000252599 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
COLGALT1-201ENST00000252599 B4DSR2 109 aa9.55□□□□□ -0.88
COLGALT1-201ENST00000252599 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
COLGALT1-201ENST00000252599 C16orf90A8MZG2 172 aa9.54□□□□□ -0.88
COLGALT1-201ENST00000252599 DEFB112Q30KQ8 113 aa9.54□□□□□ -0.88
COLGALT1-201ENST00000252599 GPHB5Q86YW7 130 aa9.54□□□□□ -0.88
COLGALT1-201ENST00000252599 UTP20O75691 2785 aaKnown RBP9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 NPBQ8NG41 125 aa9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 BCE1O60756 84 aa9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 LMO4P61968 165 aa9.53□□□□□ -0.88
COLGALT1-201ENST00000252599 CLPSL1A2RUU4 121 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 DNAJC9-AS1A6NH13 148 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 CELSR1Q9NYQ6 3014 aa9.52□□□□□ -0.89
COLGALT1-201ENST00000252599 ZNF843Q8N446 348 aa9.51□□□□□ -0.89
COLGALT1-201ENST00000252599 NDUFA1O15239 70 aa9.51□□□□□ -0.89
COLGALT1-201ENST00000252599 PRM2P04554 102 aa9.51□□□□□ -0.89
COLGALT1-201ENST00000252599 LITAFQ99732 161 aa9.51□□□□□ -0.89
COLGALT1-201ENST00000252599 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 IGHV3-53P01767 116 aa9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 MAST4O15021 2626 aa9.5□□□□□ -0.89
COLGALT1-201ENST00000252599 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 IGHV3-16A0A0C4DH30 117 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 INSP01308 110 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 Q1T7F1 81 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 IGHV4-4A0A075B6R2 117 aa9.49□□□□□ -0.89
COLGALT1-201ENST00000252599 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
COLGALT1-201ENST00000252599 DEFB131AP59861 70 aa9.47□□□□□ -0.89
COLGALT1-201ENST00000252599 PRR9Q5T870 116 aa9.47□□□□□ -0.89
COLGALT1-201ENST00000252599 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
COLGALT1-201ENST00000252599 F8P00451 2351 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms