RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 PRRC2AP48634 2157 aaKnown RBP4.16□□□□□ -1.74
SCARB2-218ENST00000639715 IGLV1-40P01703 118 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 SLURP1P55000 103 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 ZNF561-AS1K7EIQ3 104 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 PSPHP1O15172 72 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 RPL28P46779 137 aaKnown RBP4.16□□□□□ -1.74
SCARB2-218ENST00000639715 DEFB113Q30KQ7 82 aa4.16□□□□□ -1.74
SCARB2-218ENST00000639715 RNASE3P12724 160 aaKnown RBP4.15□□□□□ -1.74
SCARB2-218ENST00000639715 POLR2KP53803 58 aaKnown RBP4.15□□□□□ -1.74
SCARB2-218ENST00000639715 ABCA12Q86UK0 2595 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 PRR9Q5T870 116 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 SND1-IT1Q9HBX3 110 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 HIVEP3Q5T1R4 2406 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
SCARB2-218ENST00000639715 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
SCARB2-218ENST00000639715 M0QY20 66 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 CCL24O00175 119 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 DEFB136Q30KP8 78 aa4.15□□□□□ -1.75
SCARB2-218ENST00000639715 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 PLAC8L1A1L4L8 177 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 TSHBP01222 138 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 ESRGQ1W209 222 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 C4orf3Q8WVX3 66 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 NAV2Q8IVL1 2488 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 MYO9AB2RTY4 2548 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 ZFYVE26Q68DK2 2539 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 Q6YL49 198 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 IGLV4-3A0A075B6K6 122 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 H7BZZ5 65 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 EIF4EBP3O60516 100 aaPredicted RBP4.14□□□□□ -1.75
SCARB2-218ENST00000639715 APRG1Q8IVJ8 170 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 MIR7-3HGQ8N6C7 128 aa4.14□□□□□ -1.75
SCARB2-218ENST00000639715 FN1P02751 2386 aaKnown RBP4.13□□□□□ -1.75
SCARB2-218ENST00000639715 K7EQD1 137 aa4.13□□□□□ -1.75
SCARB2-218ENST00000639715 DEFB130BP0DP73 79 aa4.13□□□□□ -1.75
SCARB2-218ENST00000639715 DEFB130AP0DP74 79 aa4.13□□□□□ -1.75
SCARB2-218ENST00000639715 C16orf74Q96GX8 76 aa4.13□□□□□ -1.75
SCARB2-218ENST00000639715 LINC01600Q96MT4 127 aa4.13□□□□□ -1.75
SCARB2-218ENST00000639715 ASH1LQ9NR48 2969 aaKnown RBP4.13□□□□□ -1.75
SCARB2-218ENST00000639715 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
SCARB2-218ENST00000639715 SCXQ7RTU7 201 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 MAP6D1Q9H9H5 199 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 NOP10Q9NPE3 64 aaKnown RBP4.12□□□□□ -1.75
SCARB2-218ENST00000639715 CDKN2A-AS1Q9UH64 79 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 KLK9Q2XQG4 91 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 HIVEP2P31629 2446 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 A0A1W2PPR1 153 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 HTN3P15516 51 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 CFHR3Q02985 330 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 AMELXQ99217 191 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 F8P00451 2351 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 COL6A3P12111 3177 aa4.12□□□□□ -1.75
SCARB2-218ENST00000639715 CYSRT1A8MQ03 144 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 Q8N2B8 174 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 TMEM256-PLSCR3K7ERE1 68 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 DEFB114Q30KQ6 69 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 LYRM9A8MSI8 78 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
SCARB2-218ENST00000639715 NDUFA1O15239 70 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 UBE2BP63146 152 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 FAM218AQ96MZ4 157 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 RANBP2P49792 3224 aaKnown RBP4.1□□□□□ -1.75
SCARB2-218ENST00000639715 USP24Q9UPU5 2620 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 APOC4P55056 127 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 NREPQ16612 68 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 Q8N3U1 123 aa4.1□□□□□ -1.75
SCARB2-218ENST00000639715 USP9YO00507 2555 aaPredicted RBP4.1□□□□□ -1.75
SCARB2-218ENST00000639715 USP9XQ93008 2570 aaPredicted RBP4.1□□□□□ -1.75
SCARB2-218ENST00000639715 A0A087WYN8 130 aa4.09□□□□□ -1.75
SCARB2-218ENST00000639715 PRR4Q16378 134 aa4.09□□□□□ -1.75
SCARB2-218ENST00000639715 MTORP42345 2549 aa4.09□□□□□ -1.75
SCARB2-218ENST00000639715 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
SCARB2-218ENST00000639715 ZNF702PQ9H963 129 aa4.09□□□□□ -1.75
SCARB2-218ENST00000639715 LINC00467Q9BRT7 94 aa4.09□□□□□ -1.76
SCARB2-218ENST00000639715 KLKP1Q107X0 134 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 SPTBN4Q9H254 2564 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 TRBV10-3A0A0K0K1G6 114 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 PRYO14603 147 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 TRAV10A0A0B4J240 114 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 AVPP01185 164 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 NANOS2P60321 138 aaKnown RBP4.08□□□□□ -1.76
SCARB2-218ENST00000639715 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 KIF25-AS1Q9Y6Z4 181 aa4.08□□□□□ -1.76
SCARB2-218ENST00000639715 A6NED7 52 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 LYPD5Q6UWN5 251 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 LITAFQ99732 161 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 BPY2O14599 106 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 BCE1O60756 84 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 PRR15Q8IV56 129 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 DNAJC9-AS1A6NH13 148 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 MKI67P46013 3256 aaKnown RBP4.07□□□□□ -1.76
SCARB2-218ENST00000639715 GYPEP15421 78 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 Q6ZTI0 123 aa4.07□□□□□ -1.76
SCARB2-218ENST00000639715 ANGP03950 147 aaKnown RBP4.06□□□□□ -1.76
SCARB2-218ENST00000639715 COL27A1Q8IZC6 1860 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms