RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 MRPS36P82909 103 aaKnown RBP9.34□□□□□ -0.91
MSH6-215ENST00000622629 POM121L12Q8N7R1 296 aa9.34□□□□□ -0.91
MSH6-215ENST00000622629 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
MSH6-215ENST00000622629 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
MSH6-215ENST00000622629 Q6ZSN1 163 aa9.34□□□□□ -0.91
MSH6-215ENST00000622629 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
MSH6-215ENST00000622629 TIRAPP58753 221 aa9.33□□□□□ -0.92
MSH6-215ENST00000622629 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 COX7A2LO14548 114 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 LECT2O14960 151 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 INAFM1C9JVW0 142 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 NDUFA1O15239 70 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 C9orf66Q5T8R8 295 aa9.32□□□□□ -0.92
MSH6-215ENST00000622629 ATP5G1P05496 136 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 WDFY3Q8IZQ1 3526 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 LRBAP50851 2863 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
MSH6-215ENST00000622629 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 FLNCQ14315 2725 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 FLNAP21333 2647 aaKnown RBP9.31□□□□□ -0.92
MSH6-215ENST00000622629 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
MSH6-215ENST00000622629 DEFB121Q5J5C9 76 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 FAM222AQ5U5X8 452 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 Q9UF83 564 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
MSH6-215ENST00000622629 C1orf195Q5TG92 126 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 H0YGX0 51 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 GHRHP01286 108 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
MSH6-215ENST00000622629 LINC00269Q8N2A0 174 aa9.28□□□□□ -0.92
MSH6-215ENST00000622629 ORMDL1Q9P0S3 153 aa9.28□□□□□ -0.92
MSH6-215ENST00000622629 TRBV6-4A0A1B0GX49 114 aa9.27□□□□□ -0.92
MSH6-215ENST00000622629 UBE2D3P61077 147 aa9.27□□□□□ -0.92
MSH6-215ENST00000622629 UBE2D2P62837 147 aa9.27□□□□□ -0.92
MSH6-215ENST00000622629 SPANXCQ9NY87 97 aa9.27□□□□□ -0.92
MSH6-215ENST00000622629 DCHS1Q96JQ0 3298 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 XGP55808 180 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 COX6A2Q02221 97 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 AMELXQ99217 191 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 NDUFC2O95298 119 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 TMEM126AQ9H061 195 aa9.27□□□□□ -0.93
MSH6-215ENST00000622629 LY6G6DO95868 133 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 ITPR3Q14573 2671 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 HAMPP81172 84 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 LAMA5O15230 3695 aa9.26□□□□□ -0.93
MSH6-215ENST00000622629 IGKV3D-7A0A0C4DH55 119 aa9.25□□□□□ -0.93
MSH6-215ENST00000622629 FAM236AA0A1B0GUQ0 79 aa9.25□□□□□ -0.93
MSH6-215ENST00000622629 FAM236BA0A1B0GV22 79 aa9.25□□□□□ -0.93
MSH6-215ENST00000622629 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
MSH6-215ENST00000622629 ACYP1P07311 99 aa9.25□□□□□ -0.93
MSH6-215ENST00000622629 NCR3O14931 201 aa9.24□□□□□ -0.93
MSH6-215ENST00000622629 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
MSH6-215ENST00000622629 UBL5Q9BZL1 73 aa9.24□□□□□ -0.93
MSH6-215ENST00000622629 TIMM17BO60830 172 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 C14orf132Q9NPU4 83 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 LST1O00453 97 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
MSH6-215ENST00000622629 H7C423 109 aa9.22□□□□□ -0.93
MSH6-215ENST00000622629 SLPIP03973 132 aa9.22□□□□□ -0.93
MSH6-215ENST00000622629 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
MSH6-215ENST00000622629 REG3AQ06141 175 aa9.21□□□□□ -0.93
MSH6-215ENST00000622629 BEAN1Q3B7T3 259 aa9.21□□□□□ -0.93
MSH6-215ENST00000622629 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
MSH6-215ENST00000622629 CHCHD10Q8WYQ3 142 aaPredicted RBP9.21□□□□□ -0.94
MSH6-215ENST00000622629 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
MSH6-215ENST00000622629 IBA57-AS1B1ANH7 110 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 TRACP01848 142 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
MSH6-215ENST00000622629 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
MSH6-215ENST00000622629 ZNF575Q86XF7 245 aa9.19□□□□□ -0.94
MSH6-215ENST00000622629 HILS1P60008 231 aa9.19□□□□□ -0.94
MSH6-215ENST00000622629 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
MSH6-215ENST00000622629 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
MSH6-215ENST00000622629 IGLV1-51P01701 117 aa9.19□□□□□ -0.94
MSH6-215ENST00000622629 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
MSH6-215ENST00000622629 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
MSH6-215ENST00000622629 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
MSH6-215ENST00000622629 CXCL5P42830 114 aa9.17□□□□□ -0.94
MSH6-215ENST00000622629 LYRM9A8MSI8 78 aa9.16□□□□□ -0.94
MSH6-215ENST00000622629 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms