RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 CEP192Q8TEP8 1941 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 ALPK2Q86TB3 2170 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 URB1O60287 2271 aaKnown RBP1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 PIGBOS1A0A0B4J2F0 54 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 C3orf85A0A1B0GTC6 90 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 CPSF4LA6NMK7 179 aaKnown RBP1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 M0R2N4 97 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 AKAIN1P0CW23 69 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 PYYP10082 97 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 CKS2P33552 79 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 GNG4P50150 75 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 MRPL54Q6P161 138 aaKnown RBP1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 OR5AK2Q8NH90 309 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 PP6455Q8WZ26 134 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 SEC11CQ9BY50 192 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 TMEM191AQ9H0A3 160 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 SLC35B3Q9H1N7 401 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 RABAC1Q9UI14 185 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 KMT2BQ9UMN6 2715 aaPredicted RBP1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 SPTBN1Q01082 2364 aaKnown RBP1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 HIVEP3Q5T1R4 2406 aa1.54□□□□□ -2.16
AC004542.1-201ENST00000602955 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 TRBV20-1A0A075B6N2 111 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 TRAV30A0A087WSZ9 112 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 IGKV2-40A0A087WW87 121 aaPredicted RBP1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 LOC107986453A0A1B0GWG9 222 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 INE1O15225 51 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 IGKV2D-40P01614 121 aaPredicted RBP1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 TRACP01848 142 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 STATHP02808 62 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 PRB1P04280 392 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 SAA1P0DJI8 122 aaPredicted RBP1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 LSM3P62310 102 aaKnown RBP1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 FAM74A1Q5RGS3 127 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 Q6ZUT4 128 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 LINC00269Q8N2A0 174 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 DEFB124Q8NES8 71 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 ZNF431Q8TF32 576 aaPredicted RBP1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 SORL1Q92673 2214 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 LINC00052Q96N35 136 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 SMCO4Q9NRQ5 59 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 ORMDL1Q9P0S3 153 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 ABRACLQ9P1F3 81 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 R4GMQ9 66 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 V9GYH0 126 aa1.53□□□□□ -2.16
AC004542.1-201ENST00000602955 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 TRBV6-4A0A1B0GX49 114 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 A0A1W2PRS3 328 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 TMEM262E9PQX1 116 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 PIN1P1O15428 100 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 CCL25O15444 150 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 TFF1P04155 84 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 SNCAP37840 140 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 PEA15Q15121 130 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 NCMAPQ5T1S8 102 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 C9orf62Q8N4C0 152 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 SMIM4Q8WVI0 70 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 LSM10Q969L4 123 aaKnown RBP1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 TAS2R8Q9NYW2 309 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 IER3IP1Q9Y5U9 82 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 SCN3AQ9NY46 2000 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 ABCA12Q86UK0 2595 aa1.52□□□□□ -2.17
AC004542.1-201ENST00000602955 MYO9AB2RTY4 2548 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 MED13Q9UHV7 2174 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 NINQ8N4C6 2090 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 IGHV1-24A0A0C4DH33 117 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 NAP1L6A6NFF2 107 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 TMEM14DPA8MWL7 114 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 MPV17LQ2QL34 196 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 ATOH7Q8N100 152 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 KCNRGQ8N5I3 272 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 FDCSPQ8NFU4 85 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 OR10AG1Q8NH19 301 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 BET1LQ9NYM9 111 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 MPC1Q9Y5U8 109 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 FASNP49327 2511 aaKnown RBP1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 ABCA4P78363 2273 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 CACNA1CQ13936 2221 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 CENPEQ02224 2701 aa1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
AC004542.1-201ENST00000602955 TNRC6AQ8NDV7 1962 aaKnown RBP1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 SPG11Q96JI7 2443 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 MED12Q93074 2177 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 TRAV12-2A0A075B6T6 113 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 IQCF6A8MYZ5 107 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 F8W1H4 67 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 M0R135 149 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 GEMIN2O14893 280 aaKnown RBP1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 NUPR1O60356 82 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 YPEL1O60688 119 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 MRPL33O75394 65 aaKnown RBP1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 GYPAP02724 150 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 RBP4P02753 201 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 FREM3P0C091 2139 aa1.5□□□□□ -2.17
AC004542.1-201ENST00000602955 COX7CP15954 63 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms