RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TEP1Q99973 2627 aaKnown RBP4.85□□□□□ -1.63
SMG1-217ENST00000569764 C9JCJ5 164 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 IGHV3-23P01764 117 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 GCHFRP30047 84 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 FXYD2P54710 66 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 RNF185Q96GF1 192 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 ITPR2Q14571 2701 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 IGKV3-20P01619 116 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 DYNAPQ8N1N2 210 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 PRB2P02812 416 aaPredicted RBP4.84□□□□□ -1.63
SMG1-217ENST00000569764 PRM2P04554 102 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 KIAA0087Q14695 138 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 PDZD2O15018 2839 aa4.84□□□□□ -1.63
SMG1-217ENST00000569764 TRAV21A0A0B4J279 112 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 LTAP01374 205 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 IGLV1-40P01703 118 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 SLC25A2Q9BXI2 301 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 XCL2Q9UBD3 114 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 PRO0461Q9UI25 63 aa4.84□□□□□ -1.64
SMG1-217ENST00000569764 WT1-ASQ06250 92 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 IGHV3-49A0A0A0MS15 119 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 SLC25A20O43772 301 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 UBE2AP49459 152 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 NRACQ8N912 160 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 DEFB130BP0DP73 79 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 DEFB130AP0DP74 79 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 Q8N6K4 173 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 SCXQ7RTU7 201 aa4.83□□□□□ -1.64
SMG1-217ENST00000569764 IGHV3-74A0A0B4J1X5 117 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 IGHV1-24A0A0C4DH33 117 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 PSPHP1O15172 72 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 C1orf134Q5TEV5 83 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 STAB1Q9NY15 2570 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 H3BMM0 161 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 PPP1R17O96001 155 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 EGFEM1PQ0D2K5 195 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 UBE2WQ96B02 151 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 MGAM2Q2M2H8 2515 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 C7orf65Q6ZTY9 151 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 SERP2Q8N6R1 65 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 SND1-IT1Q9HBX3 110 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 NDUFA4L2Q9NRX3 87 aa4.82□□□□□ -1.64
SMG1-217ENST00000569764 FLNAP21333 2647 aaKnown RBP4.81□□□□□ -1.64
SMG1-217ENST00000569764 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 RPL36AP83881 106 aaKnown RBP4.81□□□□□ -1.64
SMG1-217ENST00000569764 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
SMG1-217ENST00000569764 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 PRR3P79522 188 aaKnown RBP4.81□□□□□ -1.64
SMG1-217ENST00000569764 PDE6HQ13956 83 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 IGLV11-55A0A075B6I3 123 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 LYPD1Q8N2G4 141 aa4.81□□□□□ -1.64
SMG1-217ENST00000569764 SETD2Q9BYW2 2564 aaPredicted RBP4.81□□□□□ -1.64
SMG1-217ENST00000569764 TRGV1A0A0A0MS02 117 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 KPRPQ5T749 579 aaPredicted RBP4.8□□□□□ -1.64
SMG1-217ENST00000569764 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 IGKV1D-37A0A075B6S9 117 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 SERF2P84101 59 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 S4R3C0 116 aa4.8□□□□□ -1.64
SMG1-217ENST00000569764 KLLNB2CW77 178 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 K7EIL1 84 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 SBSPONQ8IVN8 264 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
SMG1-217ENST00000569764 ODF3Q96PU9 254 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 IGHV3OR16-9A0A0B4J2B5 98 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 LEPROTO15243 131 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 NPYP01303 97 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 OPRPNQ99935 248 aaPredicted RBP4.79□□□□□ -1.64
SMG1-217ENST00000569764 Q1RN00 199 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 MYMXA0A1B0GTQ4 84 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 PATE2Q6UY27 113 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 MIR17HGQ75NE6 70 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 LENEPQ9Y5L5 61 aa4.79□□□□□ -1.64
SMG1-217ENST00000569764 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 A6NED7 52 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 CCKP06307 115 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 ARL14EPLP0DKL9 152 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 SPANXN1Q5VSR9 72 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 ACYP1P07311 99 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
SMG1-217ENST00000569764 NDPQ00604 133 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 RHOHQ15669 191 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 POM121L12Q8N7R1 296 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 ZNF492Q9P255 531 aa4.78□□□□□ -1.64
SMG1-217ENST00000569764 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
SMG1-217ENST00000569764 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
SMG1-217ENST00000569764 CTXND1A0A1B0GTU2 59 aa4.77□□□□□ -1.65
SMG1-217ENST00000569764 ZNF414Q96IQ9 312 aa4.77□□□□□ -1.65
SMG1-217ENST00000569764 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
SMG1-217ENST00000569764 CXCL6P80162 114 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms