RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 KRTAP21-3Q3LHN1 58 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 TTC32Q5I0X7 151 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 Q6ZQT7 251 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 C20orf203Q8NBC4 194 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 ZNRF2Q8NHG8 242 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 COPS9Q8WXC6 57 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 UBE2WQ96B02 151 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 RHPN1-AS1Q9BWJ2 59 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 DAZ1Q9NQZ3 744 aaKnown RBP3.37□□□□□ -1.87
ATXN3-246ENST00000557030 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 ZNF256Q9Y2P7 627 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-246ENST00000557030 HIVEP1P15822 2718 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 F8P00451 2351 aa3.37□□□□□ -1.87
ATXN3-246ENST00000557030 SPTBN1Q01082 2364 aaKnown RBP3.37□□□□□ -1.87
ATXN3-246ENST00000557030 IGHV1OR15-1A0A075B7D0 117 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 A0A0J9YXY3 114 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 K7EQD1 137 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 M0QY20 66 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 TIMM17BO60830 172 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 IGHG2P01859 326 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-246ENST00000557030 EMP1P54849 157 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 NDUFV3P56181 108 aaKnown RBP3.36□□□□□ -1.87
ATXN3-246ENST00000557030 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
ATXN3-246ENST00000557030 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
ATXN3-246ENST00000557030 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 UNQ9165/PRO28630Q6UXU0 137 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 Q8N377 158 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 TIMM21Q9BVV7 248 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 BPESC1Q9GZL8 116 aa3.36□□□□□ -1.87
ATXN3-246ENST00000557030 IGLV4-3A0A075B6K6 122 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 TRAV12-3A0A0B4J271 114 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 F6UB75 175 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 ACYP1P07311 99 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 CD28P10747 220 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
ATXN3-246ENST00000557030 MIAQ16674 131 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 DEFB121Q5J5C9 76 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 C2orf82Q6UX34 121 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 LRRC75A-AS1Q8N1F1 130 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 C10orf105Q8TEF2 133 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 HIVEP3Q5T1R4 2406 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 SPG11Q96JI7 2443 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 TACC2O95359 2948 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 ABCA1O95477 2261 aa3.35□□□□□ -1.87
ATXN3-246ENST00000557030 APCP25054 2843 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 A6NDX4 124 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 H7C2G1 150 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 TRBV12-3P01733 135 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 IGHV3-30-3P0DP02 117 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 SEC61GP60059 68 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
ATXN3-246ENST00000557030 C15orf53Q8NAA6 179 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 DCANP1Q8TF63 244 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 JPT2Q9H910 190 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
ATXN3-246ENST00000557030 FBN1P35555 2871 aaKnown RBP3.33□□□□□ -1.88
ATXN3-246ENST00000557030 MTORP42345 2549 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 IGHV4-30-2A0A087WSY4 118 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 TRAV4A0A0B4J268 109 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 TRBV7-7A0A0K0K1E9 115 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 LST1O00453 97 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 IGHV3-11P01762 117 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 ATP5G1P05496 136 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 TMEM61Q8N0U2 210 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 TMEM101Q96IK0 257 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 DNAJC30Q96LL9 226 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 LINC00527Q9UJ94 153 aa3.33□□□□□ -1.88
ATXN3-246ENST00000557030 ZNF469Q96JG9 3925 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-246ENST00000557030 IGKV3-7A0A075B6H7 116 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 H3BUX3 64 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 K7EQG2 157 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 NDUFA1O15239 70 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 DEFB1P60022 68 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 BRD3OSQ6XYD6 125 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 CCL19Q99731 98 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
ATXN3-246ENST00000557030 MED13LQ71F56 2210 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 A0A096LNT2 108 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 HERVK_113P63121 156 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 LY6EQ16553 131 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 LINC00467Q9BRT7 94 aa3.31□□□□□ -1.88
ATXN3-246ENST00000557030 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
ATXN3-246ENST00000557030 A8MTW9 85 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms