RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 F2Z2F3 143 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 LINC00032P0C843 101 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 UBE2D3P61077 147 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 UBE2D2P62837 147 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 SEC11AP67812 179 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 BAGE3Q86Y29 109 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 LRRC9Q6ZRR7 1453 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 FYCO1Q9BQS8 1478 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 MYOM1P52179 1685 aa1.34□□□□□ -2.19
USP15-213ENST00000549268 ANKRD26Q9UPS8 1709 aa1.34□□□□□ -2.2
USP15-213ENST00000549268 ABCC2Q92887 1545 aa1.34□□□□□ -2.2
USP15-213ENST00000549268 ARHGEF12Q9NZN5 1544 aa1.34□□□□□ -2.2
USP15-213ENST00000549268 DCAF1Q9Y4B6 1507 aa1.34□□□□□ -2.2
USP15-213ENST00000549268 ACACBO00763 2458 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 KIF14Q15058 1648 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 UBR5O95071 2799 aaPredicted RBP1.33□□□□□ -2.2
USP15-213ENST00000549268 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 RAPGEF2Q9Y4G8 1499 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 M0R135 149 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 CDC42SE2Q9NRR3 84 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 UQCR10Q9UDW1 63 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 CDH23Q9H251 3354 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 ZFHX3Q15911 3703 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 TENM4Q6N022 2769 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 DIP2AQ14689 1571 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 MROH2BQ7Z745 1585 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 XIRP2A4UGR9 3374 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 ANKRD36BQ8N2N9 1353 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 TANC1Q9C0D5 1861 aa1.33□□□□□ -2.2
USP15-213ENST00000549268 ZNF137PP52743 207 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 VAMP8Q9BV40 100 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 BPESC1Q9GZL8 116 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 DNMBPQ6XZF7 1577 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 CELSR3Q9NYQ7 3312 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 CICQ96RK0 1608 aaPredicted RBP1.32□□□□□ -2.2
USP15-213ENST00000549268 LRRK2Q5S007 2527 aa1.32□□□□□ -2.2
USP15-213ENST00000549268 TPRP12270 2363 aaKnown RBP1.32□□□□□ -2.2
USP15-213ENST00000549268 FLNCQ14315 2725 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 ZFYVE26Q68DK2 2539 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 EFCAB5A4FU69 1503 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 FBN2P35556 2912 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 SSC5DA1L4H1 1573 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 TCHHQ07283 1943 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 MYO3AQ8NEV4 1616 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 IGLC7A0M8Q6 106 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 TMEM14DPA8MWL7 114 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 FXYD6P3P58550 94 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 GNG2P59768 71 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 SFTA2Q6UW10 78 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 AMELXQ99217 191 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 IFT172Q9UG01 1749 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 DCHS1Q96JQ0 3298 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 NOTCH1P46531 2555 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 CEP295Q9C0D2 2601 aa1.31□□□□□ -2.2
USP15-213ENST00000549268 PRDM15P57071 1507 aaPredicted RBP1.3□□□□□ -2.2
USP15-213ENST00000549268 EHBP1L1Q8N3D4 1523 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 CEP170BQ9Y4F5 1589 aaPredicted RBP1.3□□□□□ -2.2
USP15-213ENST00000549268 ZZEF1O43149 2961 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 NUP188Q5SRE5 1749 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 RICTORQ6R327 1708 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 LOC285095A0A1B0GVY8 99 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 F8VRH5 84 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 C6orf52Q5T4I8 152 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 Q6ZRX8 168 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 SPTAN1Q13813 2472 aaKnown RBP1.3□□□□□ -2.2
USP15-213ENST00000549268 TROQ12816 1431 aaPredicted RBP1.3□□□□□ -2.2
USP15-213ENST00000549268 VPS13AQ96RL7 3174 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 ADGRL2O95490 1459 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 EFCAB6Q5THR3 1501 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 KDM5DQ9BY66 1539 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 ARHGEF5Q12774 1597 aa1.3□□□□□ -2.2
USP15-213ENST00000549268 CROCC2H7BZ55 1655 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 KDM5AP29375 1690 aaKnown RBP1.29□□□□□ -2.2
USP15-213ENST00000549268 IQGAP1P46940 1657 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 PKD1L1Q8TDX9 2849 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 DSPP15924 2871 aaKnown RBP1.29□□□□□ -2.2
USP15-213ENST00000549268 SPINK9Q5DT21 86 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 TMEM170BQ5T4T1 132 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 DMXL1Q9Y485 3027 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 POLA1P09884 1462 aaPredicted RBP1.29□□□□□ -2.2
USP15-213ENST00000549268 MAP1BP46821 2468 aaKnown RBP1.29□□□□□ -2.2
USP15-213ENST00000549268 RELNP78509 3460 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 TULP4Q9NRJ4 1543 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 MROH2AA6NES4 1674 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 NF1P21359 2839 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 FRYLO94915 3013 aa1.29□□□□□ -2.2
USP15-213ENST00000549268 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 POLQO75417 2590 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 NBEAL1Q6ZS30 2694 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 COX6CP09669 75 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 CFAP126Q5VTH2 177 aa1.28□□□□□ -2.2
USP15-213ENST00000549268 NSD3Q9BZ95 1437 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms