RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 NREPQ16612 68 aa5.49□□□□□ -1.53
PTPRK-219ENST00000531050 MRPL55Q7Z7F7 128 aaKnown RBP5.49□□□□□ -1.53
PTPRK-219ENST00000531050 BBC3Q96PG8 261 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-219ENST00000531050 M0R2N4 97 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 ATP6V0E1O15342 81 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 FUSP35637 526 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRK-219ENST00000531050 Q1T7F1 81 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 Q6ZRP5 223 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 Q8N9W7 124 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 RP1L1Q8IWN7 2480 aaPredicted RBP5.48□□□□□ -1.53
PTPRK-219ENST00000531050 IGKV3-7A0A075B6H7 116 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 G3V318 75 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 K7EQG2 157 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 CCL18P55774 89 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 HAMPP81172 84 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 MINOS1Q5TGZ0 78 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 Q6ZVQ6 151 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
PTPRK-219ENST00000531050 PIEZO1Q92508 2521 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 Q6ZQT0 140 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 Q6ZSN1 163 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 TPRP12270 2363 aaKnown RBP5.47□□□□□ -1.53
PTPRK-219ENST00000531050 ANKRD11Q6UB99 2663 aaPredicted RBP5.47□□□□□ -1.53
PTPRK-219ENST00000531050 PRYO14603 147 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 CXCL6P80162 114 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 PKDREJQ9NTG1 2253 aa5.47□□□□□ -1.53
PTPRK-219ENST00000531050 hDV103S1A0JD37 113 aa5.46□□□□□ -1.53
PTPRK-219ENST00000531050 TMEM256-PLSCR3K7ERE1 68 aa5.46□□□□□ -1.53
PTPRK-219ENST00000531050 LY6G6DO95868 133 aa5.46□□□□□ -1.53
PTPRK-219ENST00000531050 LYNX1G3V0Z9 82 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 LYNX1P0DP58 116 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 STHQ8IWL8 128 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 Q8N814 137 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 DYNLRB2Q8TF09 96 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 BSNQ9UPA5 3926 aa5.46□□□□□ -1.54
PTPRK-219ENST00000531050 A0A096LNT2 108 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 C19orf54Q5BKX5 351 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 SPTBN4Q9H254 2564 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 LAMA5O15230 3695 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 LOC110117498A0A087WWA1 95 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 A8MU10 97 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 DGAT2L7PQ6IED9 249 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 ZNF843Q8N446 348 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 CACNA1BQ00975 2339 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 MED13LQ71F56 2210 aa5.45□□□□□ -1.54
PTPRK-219ENST00000531050 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 ADORA2A-AS1P86434 159 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 LINC01560Q8TB33 94 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 C11orf68Q9H3H3 251 aaKnown RBP5.44□□□□□ -1.54
PTPRK-219ENST00000531050 SPTBN2O15020 2390 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 PSPHP1O15172 72 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 C11orf45Q8TAV5 145 aa5.44□□□□□ -1.54
PTPRK-219ENST00000531050 BPY2O14599 106 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 LINC00158P58513 81 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 ACACAQ13085 2346 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 PCNX1Q96RV3 2341 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 TRBV6-4A0A1B0GX49 114 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 NDUFA4O00483 81 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 IGKV3-20P01619 116 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 LINC00588Q9Y4M8 146 aa5.43□□□□□ -1.54
PTPRK-219ENST00000531050 APC2O95996 2303 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 RNASE1P07998 156 aaKnown RBP5.42□□□□□ -1.54
PTPRK-219ENST00000531050 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
PTPRK-219ENST00000531050 NANOS2P60321 138 aaKnown RBP5.42□□□□□ -1.54
PTPRK-219ENST00000531050 SCXQ7RTU7 201 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 LINC01356Q8N9X3 169 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 ATMQ13315 3056 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 COX7B2Q8TF08 81 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 RHPN1-AS1Q9BWJ2 59 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
PTPRK-219ENST00000531050 PRB1P04280 392 aa5.41□□□□□ -1.54
PTPRK-219ENST00000531050 SPINK13Q1W4C9 94 aa5.41□□□□□ -1.54
PTPRK-219ENST00000531050 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
PTPRK-219ENST00000531050 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
PTPRK-219ENST00000531050 HIGD2AQ9BW72 106 aa5.41□□□□□ -1.54
PTPRK-219ENST00000531050 M0R378 163 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 GNLYP22749 145 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 C1orf64Q8NEQ6 169 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 UBE2E2Q96LR5 201 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 PIEZO2Q9H5I5 2752 aa5.4□□□□□ -1.54
PTPRK-219ENST00000531050 MAP1BP46821 2468 aaKnown RBP5.4□□□□□ -1.54
PTPRK-219ENST00000531050 K7EQD1 137 aa5.4□□□□□ -1.55
PTPRK-219ENST00000531050 LY6HO94772 140 aa5.4□□□□□ -1.55
PTPRK-219ENST00000531050 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
PTPRK-219ENST00000531050 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
PTPRK-219ENST00000531050 ADGRG4Q8IZF6 3080 aa5.39□□□□□ -1.55
PTPRK-219ENST00000531050 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
PTPRK-219ENST00000531050 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
PTPRK-219ENST00000531050 CEP295Q9C0D2 2601 aa5.39□□□□□ -1.55
PTPRK-219ENST00000531050 IGHV3-53P01767 116 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 APOC4P55056 127 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 C9orf66Q5T8R8 295 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 MINOS1-NBL1R4GNA1 71 aa5.38□□□□□ -1.55
PTPRK-219ENST00000531050 A8MUN3 132 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms