RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF861PO60384 105 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 COX6B1P14854 86 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 EDDM3BP56851 147 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
SQLE-203ENST00000518931 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
SQLE-203ENST00000518931 F8VRH5 84 aa3.57□□□□□ -1.84
SQLE-203ENST00000518931 M0R135 149 aa3.57□□□□□ -1.84
SQLE-203ENST00000518931 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
SQLE-203ENST00000518931 S4R3C0 116 aa3.57□□□□□ -1.84
SQLE-203ENST00000518931 MYO9BQ13459 2157 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 TRBV6-1A0A0K0K1D8 114 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 ODF3BA8MYP8 253 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 F8WEM9 126 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 ZNF137PP52743 207 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 CABIN1Q9Y6J0 2220 aa3.56□□□□□ -1.84
SQLE-203ENST00000518931 MUC22E2RYF6 1773 aaPredicted RBP3.56□□□□□ -1.84
SQLE-203ENST00000518931 IGLV3-16A0A075B6K0 115 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 IGKV3-11P04433 115 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 FAM167A-AS1Q96KT0 104 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 BPESC1Q9GZL8 116 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 C22orf24Q9Y442 160 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 MUC4Q99102 2169 aa3.55□□□□□ -1.84
SQLE-203ENST00000518931 IGLV2-18A0A075B6J9 118 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 IGKV3D-11A0A0A0MRZ8 115 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 D6R8Y8 96 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 ERHP84090 104 aaKnown RBP3.54□□□□□ -1.84
SQLE-203ENST00000518931 DEFB113Q30KQ7 82 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.54□□□□□ -1.84
SQLE-203ENST00000518931 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
SQLE-203ENST00000518931 TRAV23DV6A0A075B6W5 121 aa3.53□□□□□ -1.84
SQLE-203ENST00000518931 RPS27P42677 84 aaKnown RBP3.53□□□□□ -1.84
SQLE-203ENST00000518931 Q8TAT8 98 aa3.53□□□□□ -1.84
SQLE-203ENST00000518931 PCNX2A6NKB5 2137 aa3.53□□□□□ -1.84
SQLE-203ENST00000518931 MDC1Q14676 2089 aaKnown RBP3.53□□□□□ -1.84
SQLE-203ENST00000518931 COL4A6Q14031 1691 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 IGKV3D-7A0A0C4DH55 119 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 CXorf51AA0A1B0GTR3 108 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 NDUFA3O95167 84 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 IGLV3-1P01715 115 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 KPRPQ5T749 579 aaPredicted RBP3.52□□□□□ -1.85
SQLE-203ENST00000518931 ZNF833PQ6ZTB9 187 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 LIMD2Q9BT23 127 aa3.52□□□□□ -1.85
SQLE-203ENST00000518931 A0A087WVE0 104 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 ARMS2P0C7Q2 107 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 PRB4P10163 310 aaPredicted RBP3.51□□□□□ -1.85
SQLE-203ENST00000518931 Q8N6K4 173 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 LTBP2Q14767 1821 aa3.51□□□□□ -1.85
SQLE-203ENST00000518931 COL5A1P20908 1838 aaPredicted RBP3.5□□□□□ -1.85
SQLE-203ENST00000518931 SPINT3P49223 89 aa3.5□□□□□ -1.85
SQLE-203ENST00000518931 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
SQLE-203ENST00000518931 LINC00322Q6ZN03 302 aaPredicted RBP3.5□□□□□ -1.85
SQLE-203ENST00000518931 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
SQLE-203ENST00000518931 OBSCN-AS1Q96MR7 158 aa3.5□□□□□ -1.85
SQLE-203ENST00000518931 TRAV12-3A0A0B4J271 114 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 TRAV22A0A0B4J277 110 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 IGIPA6NJ69 53 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 I3L3M4 83 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 DNAL4O96015 105 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 P0C880 135 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 C10orf128Q5T292 105 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 KRTAP26-1Q6PEX3 210 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 MUSTN1Q8IVN3 82 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 Q9BRP9 147 aa3.49□□□□□ -1.85
SQLE-203ENST00000518931 MOBPQ13875 183 aa3.48□□□□□ -1.85
SQLE-203ENST00000518931 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
SQLE-203ENST00000518931 LYPD1Q8N2G4 141 aa3.48□□□□□ -1.85
SQLE-203ENST00000518931 AMELXQ99217 191 aa3.48□□□□□ -1.85
SQLE-203ENST00000518931 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
SQLE-203ENST00000518931 TRBV7-4A0A0J9YYF1 115 aa3.47□□□□□ -1.85
SQLE-203ENST00000518931 A0A1W2PNM2 257 aa3.47□□□□□ -1.85
SQLE-203ENST00000518931 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
SQLE-203ENST00000518931 Q5VV11 94 aa3.46□□□□□ -1.86
SQLE-203ENST00000518931 TMEM14CQ9P0S9 112 aa3.46□□□□□ -1.86
SQLE-203ENST00000518931 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 M0R3E3 92 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 RTL8CO15255 209 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 PDE6HQ13956 83 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 LY6EQ16553 131 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 Q86TA4 180 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 C9orf163Q8N9P6 203 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 CNFNQ9BYD5 112 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 HEATR1Q9H583 2144 aaKnown RBP3.45□□□□□ -1.86
SQLE-203ENST00000518931 TMEM14BQ9NUH8 114 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 MYOFQ9NZM1 2061 aa3.45□□□□□ -1.86
SQLE-203ENST00000518931 COL4A2P08572 1712 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 M0R1W7 72 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 PPP1R17O96001 155 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 C1orf137Q5JT78 98 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 Q6ZTI0 123 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 R4GN34 69 aa3.44□□□□□ -1.86
SQLE-203ENST00000518931 TET1Q8NFU7 2136 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms