RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 F5H768 121 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 HTN1P15515 57 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.41□□□□□ -1.86
ABCB1-208ENST00000491360 OBSCN-AS1Q96MR7 158 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 TACC2O95359 2948 aa3.41□□□□□ -1.86
ABCB1-208ENST00000491360 EP300Q09472 2414 aaPredicted RBP3.41□□□□□ -1.86
ABCB1-208ENST00000491360 IGKV3D-7A0A0C4DH55 119 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 TRBV10-1A0A0K0K1A3 114 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 RBMY1BA6NDE4 496 aaKnown RBP3.4□□□□□ -1.87
ABCB1-208ENST00000491360 RBMY1EA6NEQ0 496 aaKnown RBP3.4□□□□□ -1.87
ABCB1-208ENST00000491360 INSP01308 110 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 RBMY1DP0C7P1 496 aaKnown RBP3.4□□□□□ -1.87
ABCB1-208ENST00000491360 DEFB131AP59861 70 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 RPL36AP83881 106 aaKnown RBP3.4□□□□□ -1.87
ABCB1-208ENST00000491360 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 C11orf72Q8NBR9 251 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 SPENQ96T58 3664 aaKnown RBP3.4□□□□□ -1.87
ABCB1-208ENST00000491360 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 Q9HAA7 133 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 Q9UF83 564 aa3.4□□□□□ -1.87
ABCB1-208ENST00000491360 PTPRQQ9UMZ3 2332 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 WDFY4Q6ZS81 3184 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 A0A087WYN8 130 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 IGHV4-61A0A0C4DH41 118 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 NDUFC2-KCTD14E9PQ53 114 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 K7EQD1 137 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 MSMBP08118 114 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 HOXD3P31249 432 aaPredicted RBP3.39□□□□□ -1.87
ABCB1-208ENST00000491360 UCNP55089 124 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 ATP5J2P56134 94 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 MIR7-3HGQ8N6C7 128 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 LINC00337Q8N6G1 96 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 SMIM11BQ8TCY0 68 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 C10orf105Q8TEF2 133 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 COX7B2Q8TF08 81 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 SND1-IT1Q9HBX3 110 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 C14orf132Q9NPU4 83 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 DMDP11532 3685 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 ANKRD11Q6UB99 2663 aaPredicted RBP3.39□□□□□ -1.87
ABCB1-208ENST00000491360 DCHS1Q96JQ0 3298 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 SPTA1P02549 2419 aa3.39□□□□□ -1.87
ABCB1-208ENST00000491360 LRBAP50851 2863 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 HRNRQ86YZ3 2850 aaPredicted RBP3.38□□□□□ -1.87
ABCB1-208ENST00000491360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.38□□□□□ -1.87
ABCB1-208ENST00000491360 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 UBE2L6O14933 153 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 LECT2O14960 151 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 NDUFC2O95298 119 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 LINC00158P58513 81 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 C10orf99Q6UWK7 81 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 UBE2E2Q96LR5 201 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 TMEM243Q9BU79 118 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 LINC00846Q9NV44 126 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 ORMDL1Q9P0S3 153 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
ABCB1-208ENST00000491360 BSNQ9UPA5 3926 aa3.38□□□□□ -1.87
ABCB1-208ENST00000491360 MGAQ8IWI9 3026 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 HIVEP3Q5T1R4 2406 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 IGHV4-59P01825 116 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 PRM2P04554 102 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 CCKP06307 115 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 CCL18P55774 89 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 LINC01561Q8N1V8 128 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 KIR2DL5BQ8NHK3 375 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 MAP6D1Q9H9H5 199 aa3.37□□□□□ -1.87
ABCB1-208ENST00000491360 SPTAN1Q13813 2472 aaKnown RBP3.36□□□□□ -1.87
ABCB1-208ENST00000491360 A0A087WVE0 104 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 TRGV1A0A0A0MS02 117 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 TRAV25A0A0B4J276 109 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 TRBV10-3A0A0K0K1G6 114 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 B4DSR2 109 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 NCR3O14931 201 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 BCE1O60756 84 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 LY6G6DO95868 133 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 NBL1P41271 181 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 HILS1P60008 231 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 DEFB112Q30KQ8 113 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
ABCB1-208ENST00000491360 CCL19Q99731 98 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 TOMM7Q9P0U1 55 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 ADGRG4Q8IZF6 3080 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 BOD1L1Q8NFC6 3051 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 AKAP13Q12802 2813 aa3.36□□□□□ -1.87
ABCB1-208ENST00000491360 BDP1A6H8Y1 2624 aa3.35□□□□□ -1.87
ABCB1-208ENST00000491360 AKAP6Q13023 2319 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms