RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 SPTA1P02549 2419 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 IGHV3-74A0A0B4J1X5 117 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 SNCGO76070 127 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 SMIM13P0DJ93 91 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 C7orf33Q8WU49 177 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 RMI2Q96E14 147 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 RHPN1-AS1Q9BWJ2 59 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 PHLDA3Q9Y5J5 127 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 ABCA2Q9BZC7 2435 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 SPTBN2O15020 2390 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 CEP295Q9C0D2 2601 aa3.81□□□□□ -1.8
PCGEM1-201ENST00000454040 IGHV3-49A0A0A0MS15 119 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 F8VRH5 84 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 H3BVH4 76 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 K7ERJ3 54 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 BRD3OSQ6XYD6 125 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 PCP2Q8IVA1 136 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 SLC25A29Q8N8R3 303 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 MUC4Q99102 2169 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 TRBV6-5A0A0K0K1A5 114 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 RNASE3P12724 160 aaKnown RBP3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 RNASE4P34096 147 aaKnown RBP3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 NPC2P61916 151 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 BLCAPP62952 87 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 LY6EQ16553 131 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 PRR9Q5T870 116 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 C7orf65Q6ZTY9 151 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 KLK5Q9Y337 293 aaPredicted RBP3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 KIF25-AS1Q9Y6Z4 181 aa3.8□□□□□ -1.8
PCGEM1-201ENST00000454040 MED13LQ71F56 2210 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 TRBV25-1A0A075B6N4 114 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 TRAV2A0A0B4J234 112 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 LY6G6DO95868 133 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 PRB4P10163 310 aaPredicted RBP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 FXYD7P58549 80 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 MRPS36P82909 103 aaKnown RBP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 ZC2HC1BQ5TFG8 222 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 CEND1Q8N111 149 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 MRPL35Q9NZE8 188 aaKnown RBP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 DCHS1Q96JQ0 3298 aa3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.79□□□□□ -1.8
PCGEM1-201ENST00000454040 LAMA5O15230 3695 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 A0A0J9YX75 114 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 A0A1B0GUV1 79 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 IGHV3-11P01762 117 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 COX7CP15954 63 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 LINC00315P59091 139 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 C14orf178Q8N769 122 aaPredicted RBP3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 AGRNO00468 2067 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 NBASA2RRP1 2371 aa3.78□□□□□ -1.8
PCGEM1-201ENST00000454040 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 MYMXA0A1B0GTQ4 84 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 A8MTW9 85 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 H3BUT2 72 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 GNRH2O43555 120 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 RHOHQ15669 191 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 DAND5Q8N907 189 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 DIRC1Q969H9 104 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 IGF2RP11717 2491 aa3.77□□□□□ -1.81
PCGEM1-201ENST00000454040 A0A096LNT2 108 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 IGIPA6NJ69 53 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 MGPP08493 103 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 DEFB112Q30KQ8 113 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 Q6ZQT7 251 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 Q8N2B8 174 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 ATRXP46100 2492 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 PRRC2AP48634 2157 aaKnown RBP3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 CR1P17927 2039 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 TRBV7-3A0A075B6L6 115 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 COX6B1P14854 86 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 FXYD2P54710 66 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 RPL39LQ96EH5 51 aaKnown RBP3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 LINC00467Q9BRT7 94 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
PCGEM1-201ENST00000454040 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 TRAV12-3A0A0B4J271 114 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 M0QY20 66 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 UBE2AP49459 152 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms