RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ATP5G1P05496 136 aa4.4□□□□□ -1.71
GTF3C3-202ENST00000409364 KRTAP10-11P60412 298 aa4.4□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A0J9YY99 117 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 DEFB4AO15263 64 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV3-30-3P0DP02 117 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 FXYD2P54710 66 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 VAMP3Q15836 100 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 NBEAL2Q6ZNJ1 2754 aa4.39□□□□□ -1.71
GTF3C3-202ENST00000409364 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 GAGE6Q13070 117 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 UBE2V1Q13404 147 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 CDKN2A-AS1Q9UH64 79 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV3-64A0A075B6Q5 118 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 C12orf74Q32Q52 190 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 Q6ZVH6 145 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 NHP2Q9NX24 153 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 NDUFA12Q9UI09 145 aa4.38□□□□□ -1.71
GTF3C3-202ENST00000409364 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 TRAV8-3A0A0A6YYJ7 113 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 TMEM262E9PQX1 116 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 F5H768 121 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 K7EP13 123 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 CCL25O15444 150 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 COX6A2Q02221 97 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 STAB1Q9NY15 2570 aa4.37□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 H3BUT2 72 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV3-30P01768 117 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV3-30-5P0DP03 117 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 SAMD5Q5TGI4 173 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 ZFAND6Q6FIF0 208 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 C10orf126Q8N4M7 172 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 RAB37Q96AX2 223 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 CELA1Q9UNI1 258 aa4.36□□□□□ -1.71
GTF3C3-202ENST00000409364 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 GAGE10A6NGK3 116 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 G3V4G9 280 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 H3BNG1 76 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 TIMM17BO60830 172 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 FABP2P12104 132 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 CIRBPQ14011 172 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 ICOSQ9Y6W8 199 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 IGLL5B9A064 214 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 NDUFA1O15239 70 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 HTN3P15516 51 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 RBX1P62877 108 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 SS18Q15532 418 aa4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 C11orf68Q9H3H3 251 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A096LPF7 62 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 IGHV3OR16-9A0A0B4J2B5 98 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 LINC00959A0A1B0GUT2 108 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 PRSS2P07478 247 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 IFITM1P13164 125 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 HERV-K104P63124 156 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 LELP1Q5T871 98 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
GTF3C3-202ENST00000409364 A0A087WZ39 114 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 K7ERJ3 54 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 LITAFQ99732 161 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 SPANXDQ9BXN6 97 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 SPANXCQ9NY87 97 aa4.33□□□□□ -1.72
GTF3C3-202ENST00000409364 ZNF561-AS1K7EIQ3 104 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 K7EP34 96 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 APOMO95445 188 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 CFC1P0CG37 223 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 MIAQ16674 131 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 Q9H8V8 135 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 RETNQ9HD89 108 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 SPCS1Q9Y6A9 102 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 LYPD5Q6UWN5 251 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 LINC00269Q8N2A0 174 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms