RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ERCC6L2Q5T890 1561 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 TTC37Q6PGP7 1564 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 KIAA1109Q2LD37 5005 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 ABCA4P78363 2273 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 KCPQ6ZWJ8 1503 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 PSME4Q14997 1843 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 UQCRHLA0A096LP55 91 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 TRBV7-7A0A0K0K1E9 115 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 SYS1-DBNDD2H3BUS1 97 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 BCE1O60756 84 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 PSMG4Q5JS54 123 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 C10orf113Q5VZT2 155 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 PRO1933Q9H354 126 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 RAPGEF2Q9Y4G8 1499 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 BAZ1AQ9NRL2 1556 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 SCN7AQ01118 1682 aa0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 SETD2Q9BYW2 2564 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P17-201ENST00000403495 C7orf77A4D0Y5 90 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 FDCSPQ8NFU4 85 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 CNFNQ9BYD5 112 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 PRO0255Q9UI72 69 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 SPCS1Q9Y6A9 102 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 V9GYS6 101 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 ANKRD26Q9UPS8 1709 aa0.63□□□□□ -2.31
HMGB1P17-201ENST00000403495 COL4A6Q14031 1691 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 ABCA12Q86UK0 2595 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 DOPEY1Q5JWR5 2465 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 MAST4O15021 2626 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 MARF1Q9Y4F3 1742 aaKnown RBP0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 NCOR1O75376 2440 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 A0A087WVE0 104 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 GYPAP02724 150 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 GNG2P59768 71 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 ARHGEF12Q9NZN5 1544 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 AKAP12Q02952 1782 aa0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 FLNBO75369 2602 aaKnown RBP0.62□□□□□ -2.31
HMGB1P17-201ENST00000403495 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 COL6A5A8TX70 2615 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 PIEZO1Q92508 2521 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 TRBV6-1A0A0K0K1D8 114 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 LINC01600Q96MT4 127 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 LINC00846Q9NV44 126 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 ANKRD11Q6UB99 2663 aaPredicted RBP0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 C1orf167Q5SNV9 1468 aa0.61□□□□□ -2.31
HMGB1P17-201ENST00000403495 VWFP04275 2813 aa0.6□□□□□ -2.31
HMGB1P17-201ENST00000403495 LCN9Q8WX39 176 aa0.6□□□□□ -2.31
HMGB1P17-201ENST00000403495 HIVEP3Q5T1R4 2406 aa0.6□□□□□ -2.31
HMGB1P17-201ENST00000403495 ZFHX3Q15911 3703 aa0.6□□□□□ -2.31
HMGB1P17-201ENST00000403495 LAMC1P11047 1609 aa0.6□□□□□ -2.31
HMGB1P17-201ENST00000403495 EPG5Q9HCE0 2579 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 TENM3Q9P273 2699 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 PRH1P02810 166 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 ZNF720Q7Z2F6 126 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 TP53AIP1Q9HCN2 124 aa0.59□□□□□ -2.31
HMGB1P17-201ENST00000403495 STAB1Q9NY15 2570 aa0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 POLA1P09884 1462 aaPredicted RBP0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 NRXN1Q9ULB1 1477 aa0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 SBF2Q86WG5 1849 aa0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 EPRSP07814 1512 aaKnown RBP0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 ABCC2Q92887 1545 aa0.59□□□□□ -2.32
HMGB1P17-201ENST00000403495 A0A0C4DFX4 3053 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 TTC28Q96AY4 2481 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 KDM3BQ7LBC6 1761 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 ZNF292O60281 2723 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 H3BQF6 201 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 ARMS2P0C7Q2 107 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 ETDBQ3ZM63 59 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 C20orf78Q9BR46 151 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 FANCAO15360 1455 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 NLRP1Q9C000 1473 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 FLNAP21333 2647 aaKnown RBP0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 BPTFQ12830 3046 aa0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 MAP1BP46821 2468 aaKnown RBP0.58□□□□□ -2.32
HMGB1P17-201ENST00000403495 MUC2Q02817 5179 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 BDP1A6H8Y1 2624 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 FAM208BQ5VWN6 2430 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 KNTC1P50748 2209 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 KIAA0100Q14667 2235 aaKnown RBP0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 CCDC168Q8NDH2 2452 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 FLNCQ14315 2725 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 ATP10BO94823 1461 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 PIGYQ3MUY2 71 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 DEFB107AQ8IZN7 70 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 C9orf62Q8N4C0 152 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 SMR3AQ99954 134 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 NUP188Q5SRE5 1749 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 NAV3Q8IVL0 2385 aa0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 FASNP49327 2511 aaKnown RBP0.57□□□□□ -2.32
HMGB1P17-201ENST00000403495 CHD6Q8TD26 2715 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 TRBV7-4A0A0J9YYF1 115 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 PVALEFA0A1B0GWK0 134 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 F8WEM9 126 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms