RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 KRTDAPP60985 99 aa6□□□□□ -1.45
BRCC3-206ENST00000399042 Q6ZR54 194 aa6□□□□□ -1.45
BRCC3-206ENST00000399042 PRR34Q9NV39 138 aa6□□□□□ -1.45
BRCC3-206ENST00000399042 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
BRCC3-206ENST00000399042 C20orf202A1L168 122 aa5.99□□□□□ -1.45
BRCC3-206ENST00000399042 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
BRCC3-206ENST00000399042 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
BRCC3-206ENST00000399042 AMELXQ99217 191 aa5.99□□□□□ -1.45
BRCC3-206ENST00000399042 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
BRCC3-206ENST00000399042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
BRCC3-206ENST00000399042 VPS13DQ5THJ4 4388 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 COX7A2LO14548 114 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 UBE2D1P51668 147 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 HERVK_113P63121 156 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 CD164L2Q6UWJ8 174 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 HIST3H2BBQ8N257 126 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
BRCC3-206ENST00000399042 PACRGQ96M98 296 aaPredicted RBP5.98□□□□□ -1.45
BRCC3-206ENST00000399042 A0A0J9YXV3 536 aa5.97□□□□□ -1.45
BRCC3-206ENST00000399042 H3BRM9 83 aa5.97□□□□□ -1.45
BRCC3-206ENST00000399042 LECT2O14960 151 aa5.97□□□□□ -1.45
BRCC3-206ENST00000399042 APOMO95445 188 aa5.97□□□□□ -1.45
BRCC3-206ENST00000399042 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
BRCC3-206ENST00000399042 TRAV12-1A0A0B4J245 112 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 TINCRA0A1B0GVN0 87 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 SYS1-DBNDD2H3BUS1 97 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 PET117Q6UWS5 81 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 HIST1H2BLQ99880 126 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 CHAC1Q9BUX1 264 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 LYSTQ99698 3801 aa5.96□□□□□ -1.46
BRCC3-206ENST00000399042 F8VRH5 84 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 DPM2O94777 84 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 PRSS2P07478 247 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 C3orf79P0CE67 100 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 PLNP26678 52 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 PMCHL2Q9BQD1 86 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 MRPL35Q9NZE8 188 aaKnown RBP5.95□□□□□ -1.46
BRCC3-206ENST00000399042 DNAH1Q9P2D7 4330 aa5.95□□□□□ -1.46
BRCC3-206ENST00000399042 hDV102S1A0JD36 115 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 USP17L23D6RBM5 183 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 IGLC3P0DOY3 106 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 COX6A2Q02221 97 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 FOXI1Q12951 378 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 TOMM7Q9P0U1 55 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 CDKN2A-AS1Q9UH64 79 aa5.94□□□□□ -1.46
BRCC3-206ENST00000399042 IGHV1-58A0A0C4DH39 117 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 IGKCP01834 107 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 AKR1D1P51857 326 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 HERVK_113P61574 105 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 ODF1Q14990 250 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 LINC00336Q6ZUF6 198 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
BRCC3-206ENST00000399042 IGHV3-64A0A075B6Q5 118 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 A0A087WZ39 114 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 C11orf86A6NJI1 115 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 RTL8CO15255 209 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 SPINK8P0C7L1 97 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 C6orf226Q5I0X4 101 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 SPATA12Q7Z6I5 190 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
BRCC3-206ENST00000399042 IGLV4-69A0A075B6H9 119 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-206ENST00000399042 A0A087WTM6 91 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 HSBP1L1C9JCN9 74 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 ZNF22P17026 224 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-206ENST00000399042 CKS1BP61024 79 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-206ENST00000399042 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
BRCC3-206ENST00000399042 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.9□□□□□ -1.46
BRCC3-206ENST00000399042 LINC01545Q5VT33 79 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 KRTAP26-1Q6PEX3 210 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 ATOH7Q8N100 152 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 LINC01561Q8N1V8 128 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 CAMK2N2Q96S95 79 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
BRCC3-206ENST00000399042 Q8N814 137 aa5.89□□□□□ -1.47
BRCC3-206ENST00000399042 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
BRCC3-206ENST00000399042 LINC00526Q96FQ7 95 aa5.89□□□□□ -1.47
BRCC3-206ENST00000399042 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
BRCC3-206ENST00000399042 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
BRCC3-206ENST00000399042 HYDINQ4G0P3 5121 aa5.88□□□□□ -1.47
BRCC3-206ENST00000399042 IGLV5-45A0A087WSX0 123 aa5.88□□□□□ -1.47
BRCC3-206ENST00000399042 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
BRCC3-206ENST00000399042 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms