RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 LELP1Q5T871 98 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 C11orf45Q8TAV5 145 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 A6NDN8 102 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 K7EP13 123 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 C10orf126Q8N4M7 172 aa10.81□□□□□ -0.68
HDAC8-209ENST00000373589 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
HDAC8-209ENST00000373589 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
HDAC8-209ENST00000373589 Q6ZVH6 145 aa10.8□□□□□ -0.68
HDAC8-209ENST00000373589 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
HDAC8-209ENST00000373589 COX11Q9Y6N1 276 aa10.8□□□□□ -0.68
HDAC8-209ENST00000373589 MRAPQ8TCY5 172 aa10.79□□□□□ -0.68
HDAC8-209ENST00000373589 NDUFA12Q9UI09 145 aa10.79□□□□□ -0.68
HDAC8-209ENST00000373589 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 LINC00959A0A1B0GUT2 108 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 LYPD5Q6UWN5 251 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 A0A0J9YXY3 114 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 LURAP1LQ8IV03 231 aa10.78□□□□□ -0.68
HDAC8-209ENST00000373589 PTTG1IPP53801 180 aa10.77□□□□□ -0.69
HDAC8-209ENST00000373589 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC8-209ENST00000373589 DEFB131BA0A096LNP1 70 aa10.76□□□□□ -0.69
HDAC8-209ENST00000373589 Q8N3U1 123 aa10.76□□□□□ -0.69
HDAC8-209ENST00000373589 NDUFA1O15239 70 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 CCL25O15444 150 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 IGHV3-30P01768 117 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 IGHV3-30-5P0DP03 117 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 LITAFQ99732 161 aa10.75□□□□□ -0.69
HDAC8-209ENST00000373589 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
HDAC8-209ENST00000373589 A0A087WZ39 114 aa10.74□□□□□ -0.69
HDAC8-209ENST00000373589 SS18Q15532 418 aa10.74□□□□□ -0.69
HDAC8-209ENST00000373589 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
HDAC8-209ENST00000373589 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
HDAC8-209ENST00000373589 TMEM238C9JI98 176 aa10.73□□□□□ -0.69
HDAC8-209ENST00000373589 ANGP03950 147 aaKnown RBP10.73□□□□□ -0.69
HDAC8-209ENST00000373589 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
HDAC8-209ENST00000373589 CLPSL2Q6UWE3 100 aa10.72□□□□□ -0.69
HDAC8-209ENST00000373589 K7ERJ3 54 aa10.72□□□□□ -0.69
HDAC8-209ENST00000373589 ZNF625Q96I27 306 aaPredicted RBP10.72□□□□□ -0.69
HDAC8-209ENST00000373589 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
HDAC8-209ENST00000373589 TIMM17BO60830 172 aa10.71□□□□□ -0.69
HDAC8-209ENST00000373589 XCL1P47992 114 aa10.71□□□□□ -0.69
HDAC8-209ENST00000373589 REG3AQ06141 175 aa10.71□□□□□ -0.69
HDAC8-209ENST00000373589 Q9H8V8 135 aa10.71□□□□□ -0.69
HDAC8-209ENST00000373589 TRAV10A0A0B4J240 114 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 A6NJY4 79 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 ADAMTSL4-AS1Q5T5F5 129 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 RAB37Q96AX2 223 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 ESRGQ1W209 222 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 LINC01561Q8N1V8 128 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 PRR34Q9NV39 138 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
HDAC8-209ENST00000373589 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
HDAC8-209ENST00000373589 COX7B2Q8TF08 81 aa10.69□□□□□ -0.7
HDAC8-209ENST00000373589 CHCHD10Q8WYQ3 142 aaPredicted RBP10.68□□□□□ -0.7
HDAC8-209ENST00000373589 COL7A1Q02388 2944 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 HERV-K104P63124 156 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 WFDC10BQ8IUB3 73 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 MUSTN1Q8IVN3 82 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 H3BUT2 72 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 MIAQ16674 131 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 B9D2Q9BPU9 175 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 KLK12Q9UKR0 248 aa10.67□□□□□ -0.7
HDAC8-209ENST00000373589 IGLV10-54A0A075B6I4 117 aa10.65□□□□□ -0.7
HDAC8-209ENST00000373589 RPL24P83731 157 aaKnown RBP10.65□□□□□ -0.7
HDAC8-209ENST00000373589 VAMP3Q15836 100 aa10.65□□□□□ -0.7
HDAC8-209ENST00000373589 ENHOQ6UWT2 76 aa10.65□□□□□ -0.7
HDAC8-209ENST00000373589 C15orf53Q8NAA6 179 aa10.65□□□□□ -0.7
HDAC8-209ENST00000373589 NAA38Q9BRA0 125 aaKnown RBP10.65□□□□□ -0.7
HDAC8-209ENST00000373589 TOMM7Q9P0U1 55 aa10.65□□□□□ -0.7
HDAC8-209ENST00000373589 A4D1N5 150 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 CFC1P0CG37 223 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 FOXI1Q12951 378 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 CIRBPQ14011 172 aaKnown RBP10.64□□□□□ -0.71
HDAC8-209ENST00000373589 IGLL5B9A064 214 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 COX7A2LO14548 114 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 PRSS2P07478 247 aa10.64□□□□□ -0.71
HDAC8-209ENST00000373589 A0A1W2PPM0 123 aa10.63□□□□□ -0.71
HDAC8-209ENST00000373589 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
HDAC8-209ENST00000373589 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
HDAC8-209ENST00000373589 APOMO95445 188 aa10.62□□□□□ -0.71
HDAC8-209ENST00000373589 IFITM1P13164 125 aa10.62□□□□□ -0.71
HDAC8-209ENST00000373589 Q8IZM0 81 aa10.62□□□□□ -0.71
HDAC8-209ENST00000373589 DYNC2H1Q8NCM8 4307 aaKnown RBP10.62□□□□□ -0.71
HDAC8-209ENST00000373589 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
HDAC8-209ENST00000373589 DAND5Q8N907 189 aa10.61□□□□□ -0.71
HDAC8-209ENST00000373589 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
HDAC8-209ENST00000373589 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
HDAC8-209ENST00000373589 MEIG1Q5JSS6 88 aa10.61□□□□□ -0.71
HDAC8-209ENST00000373589 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
HDAC8-209ENST00000373589 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms