RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.01
PRKN-206ENST00000366898 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
PRKN-206ENST00000366898 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
PRKN-206ENST00000366898 IGHV4-61A0A0C4DH41 118 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 C11orf44Q8N8P7 122 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 A6NED7 52 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
PRKN-206ENST00000366898 A0A1W2PPR1 153 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 F8WDY8 70 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
PRKN-206ENST00000366898 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 RELNP78509 3460 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 IGHV4-38-2P0DP08 117 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 A0A087WZ39 114 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 PF4P02776 101 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
PRKN-206ENST00000366898 NPBQ8NG41 125 aa8.69□□□□□ -1.02
PRKN-206ENST00000366898 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
PRKN-206ENST00000366898 SBSPONQ8IVN8 264 aa8.68□□□□□ -1.02
PRKN-206ENST00000366898 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
PRKN-206ENST00000366898 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 LY6LH3BQJ8 138 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 MRGPRG-AS1Q2M3A8 158 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 FBXL19-AS1Q494R0 122 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 IGHV7-4-1A0A0J9YVY3 117 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 MP68P56378 58 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 A0A096LPF7 62 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 COX6B1P14854 86 aa8.67□□□□□ -1.02
PRKN-206ENST00000366898 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
PRKN-206ENST00000366898 BPY2O14599 106 aa8.66□□□□□ -1.02
PRKN-206ENST00000366898 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
PRKN-206ENST00000366898 ACANP16112 2415 aa8.66□□□□□ -1.02
PRKN-206ENST00000366898 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 NDUFA4O00483 81 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 SMAD5-AS1Q9Y6J3 95 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
PRKN-206ENST00000366898 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.03
PRKN-206ENST00000366898 ODF3BA8MYP8 253 aa8.65□□□□□ -1.03
PRKN-206ENST00000366898 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.03
PRKN-206ENST00000366898 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
PRKN-206ENST00000366898 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
PRKN-206ENST00000366898 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
PRKN-206ENST00000366898 CNFNQ9BYD5 112 aa8.64□□□□□ -1.03
PRKN-206ENST00000366898 LMO4P61968 165 aa8.64□□□□□ -1.03
PRKN-206ENST00000366898 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
PRKN-206ENST00000366898 FSTL3O95633 263 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 MSMBP08118 114 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 NDUFA1O15239 70 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 FHL2Q14192 279 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 PRR9Q5T870 116 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 C2orf48Q96LS8 159 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
PRKN-206ENST00000366898 PROK1P58294 105 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 EBI3Q14213 229 aa8.63□□□□□ -1.03
PRKN-206ENST00000366898 SMG1Q96Q15 3661 aaKnown RBP8.63□□□□□ -1.03
PRKN-206ENST00000366898 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 C11orf71Q6IPW1 123 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 Q8N3U1 123 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 BBC3Q96PG8 261 aaPredicted RBP8.62□□□□□ -1.03
PRKN-206ENST00000366898 M0QY20 66 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 CRYGDP07320 174 aa8.62□□□□□ -1.03
PRKN-206ENST00000366898 B4DSR2 109 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 IGHV4-59P01825 116 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 C5orf56Q8N8D9 126 aa8.61□□□□□ -1.03
PRKN-206ENST00000366898 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
PRKN-206ENST00000366898 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 A0A087WW49 117 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 A0A087WYN8 130 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 JMJD1CQ15652 2540 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 WIPF1O43516 503 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 CCKP06307 115 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 USP24Q9UPU5 2620 aa8.6□□□□□ -1.03
PRKN-206ENST00000366898 TRBV6-5A0A0K0K1A5 114 aa8.59□□□□□ -1.03
PRKN-206ENST00000366898 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
PRKN-206ENST00000366898 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
PRKN-206ENST00000366898 ESRGQ1W209 222 aa8.59□□□□□ -1.03
PRKN-206ENST00000366898 TSHBP01222 138 aa8.59□□□□□ -1.03
PRKN-206ENST00000366898 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
PRKN-206ENST00000366898 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.03
PRKN-206ENST00000366898 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
PRKN-206ENST00000366898 A0A0J9YX75 114 aa8.58□□□□□ -1.04
PRKN-206ENST00000366898 PDE6GP18545 87 aa8.58□□□□□ -1.04
PRKN-206ENST00000366898 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
PRKN-206ENST00000366898 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
PRKN-206ENST00000366898 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
PRKN-206ENST00000366898 DEFB136Q30KP8 78 aa8.57□□□□□ -1.04
PRKN-206ENST00000366898 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms