RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LY6G6DO95868 133 aa8.04□□□□□ -1.12
SSU72-202ENST00000359060 UBE2WQ96B02 151 aa8.04□□□□□ -1.12
SSU72-202ENST00000359060 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 F8P00451 2351 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 FBN2P35556 2912 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 COX6A2Q02221 97 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 ZFAND6Q6FIF0 208 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 TIRAPP58753 221 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 LINC00242Q5T6M2 205 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 UNC79Q9P2D8 2635 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 TRIAP1O43715 76 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
SSU72-202ENST00000359060 UBE2D3P61077 147 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 UBE2D2P62837 147 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 APOC4P55056 127 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
SSU72-202ENST00000359060 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
SSU72-202ENST00000359060 GCN1Q92616 2671 aaKnown RBP8.01□□□□□ -1.13
SSU72-202ENST00000359060 APCP25054 2843 aa8.01□□□□□ -1.13
SSU72-202ENST00000359060 HERV-K104P63124 156 aa8.01□□□□□ -1.13
SSU72-202ENST00000359060 SETXQ7Z333 2677 aaKnown RBP8.01□□□□□ -1.13
SSU72-202ENST00000359060 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
SSU72-202ENST00000359060 NDUFA1O15239 70 aa8□□□□□ -1.13
SSU72-202ENST00000359060 FHL3Q13643 280 aa8□□□□□ -1.13
SSU72-202ENST00000359060 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
SSU72-202ENST00000359060 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
SSU72-202ENST00000359060 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
SSU72-202ENST00000359060 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
SSU72-202ENST00000359060 PRO0255Q9UI72 69 aa8□□□□□ -1.13
SSU72-202ENST00000359060 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
SSU72-202ENST00000359060 GAGE2BQ13066 116 aa8□□□□□ -1.13
SSU72-202ENST00000359060 GAGE2EQ4V326 116 aa8□□□□□ -1.13
SSU72-202ENST00000359060 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
SSU72-202ENST00000359060 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
SSU72-202ENST00000359060 CITED1Q99966 193 aa7.98□□□□□ -1.13
SSU72-202ENST00000359060 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
SSU72-202ENST00000359060 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
SSU72-202ENST00000359060 TRBV10-2A0A0K0K1G8 114 aa7.98□□□□□ -1.13
SSU72-202ENST00000359060 TRAV13-2A0A0B4J235 113 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 C16orf95Q9H693 158 aa7.97□□□□□ -1.13
SSU72-202ENST00000359060 IGLV4-60A0A075B6I1 120 aa7.96□□□□□ -1.13
SSU72-202ENST00000359060 ATP5G1P05496 136 aa7.96□□□□□ -1.13
SSU72-202ENST00000359060 TRBV30A0A0K0K1B3 111 aa7.96□□□□□ -1.13
SSU72-202ENST00000359060 S100A7L2Q5SY68 101 aa7.96□□□□□ -1.13
SSU72-202ENST00000359060 A8MTW9 85 aa7.96□□□□□ -1.14
SSU72-202ENST00000359060 TRAV26-1A0A087WT03 109 aa7.96□□□□□ -1.14
SSU72-202ENST00000359060 C3orf56Q8N813 242 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 BAALC-AS2P0C853 105 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 LINC00269Q8N2A0 174 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 FHL2Q14192 279 aa7.95□□□□□ -1.14
SSU72-202ENST00000359060 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
SSU72-202ENST00000359060 GAGE2AQ6NT46 116 aa7.94□□□□□ -1.14
SSU72-202ENST00000359060 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
SSU72-202ENST00000359060 UBR5O95071 2799 aaPredicted RBP7.93□□□□□ -1.14
SSU72-202ENST00000359060 COX7A2LO14548 114 aa7.93□□□□□ -1.14
SSU72-202ENST00000359060 TIMM17BO60830 172 aa7.93□□□□□ -1.14
SSU72-202ENST00000359060 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
SSU72-202ENST00000359060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.93□□□□□ -1.14
SSU72-202ENST00000359060 Q9HAA7 133 aa7.93□□□□□ -1.14
SSU72-202ENST00000359060 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
SSU72-202ENST00000359060 MRPL23Q16540 153 aaKnown RBP7.93□□□□□ -1.14
SSU72-202ENST00000359060 TEP1Q99973 2627 aaKnown RBP7.92□□□□□ -1.14
SSU72-202ENST00000359060 KLK12Q9UKR0 248 aa7.92□□□□□ -1.14
SSU72-202ENST00000359060 H3BT86 120 aa7.92□□□□□ -1.14
SSU72-202ENST00000359060 CSDC2Q9Y534 153 aaKnown RBP7.92□□□□□ -1.14
SSU72-202ENST00000359060 H7C423 109 aa7.92□□□□□ -1.14
SSU72-202ENST00000359060 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
SSU72-202ENST00000359060 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
SSU72-202ENST00000359060 SMIM9A6NGZ8 99 aa7.91□□□□□ -1.14
SSU72-202ENST00000359060 SCGB1A1P11684 91 aa7.91□□□□□ -1.14
SSU72-202ENST00000359060 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
SSU72-202ENST00000359060 LYRM9A8MSI8 78 aa7.9□□□□□ -1.15
SSU72-202ENST00000359060 FAM110AQ9BQ89 295 aa7.9□□□□□ -1.15
SSU72-202ENST00000359060 LST1O00453 97 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 GIG44P09565 113 aaPredicted RBP7.89□□□□□ -1.15
SSU72-202ENST00000359060 REG3AQ06141 175 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 XGP55808 180 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 CHCHD10Q8WYQ3 142 aaPredicted RBP7.89□□□□□ -1.15
SSU72-202ENST00000359060 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 LECT2O14960 151 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
SSU72-202ENST00000359060 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
SSU72-202ENST00000359060 MAST4O15021 2626 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 CUBNO60494 3623 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 IGLV5-39A0A0G2JS06 123 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 KRTAP1-1Q07627 177 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 DEFB121Q5J5C9 76 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 KIR2DL5BQ8NHK3 375 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 LITAFQ99732 161 aa7.88□□□□□ -1.15
SSU72-202ENST00000359060 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms