RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RBMY1EA6NEQ0 496 aaKnown RBP6.67□□□□□ -1.34
NECAP1-201ENST00000339754 GHRHP01286 108 aa6.67□□□□□ -1.34
NECAP1-201ENST00000339754 RBMY1DP0C7P1 496 aaKnown RBP6.67□□□□□ -1.34
NECAP1-201ENST00000339754 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
NECAP1-201ENST00000339754 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
NECAP1-201ENST00000339754 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 WFDC9Q8NEX5 89 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 ACACBO00763 2458 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 SPTAN1Q13813 2472 aaKnown RBP6.66□□□□□ -1.34
NECAP1-201ENST00000339754 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 A8MTW9 85 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 PRB1P04280 392 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 IGHV4-38-2P0DP08 117 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 PSMB8P28062 276 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 CCL18P55774 89 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 LYPD5Q6UWN5 251 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 AKAP6Q13023 2319 aa6.66□□□□□ -1.34
NECAP1-201ENST00000339754 RPL36AP83881 106 aaKnown RBP6.65□□□□□ -1.34
NECAP1-201ENST00000339754 C10orf99Q6UWK7 81 aa6.65□□□□□ -1.34
NECAP1-201ENST00000339754 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
NECAP1-201ENST00000339754 RPL36ALQ969Q0 106 aaKnown RBP6.65□□□□□ -1.34
NECAP1-201ENST00000339754 ABCA2Q9BZC7 2435 aa6.65□□□□□ -1.34
NECAP1-201ENST00000339754 PFN2P35080 140 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 XCL1P47992 114 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 XCL2Q9UBD3 114 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 FLNCQ14315 2725 aa6.64□□□□□ -1.35
NECAP1-201ENST00000339754 UTP20O75691 2785 aaKnown RBP6.64□□□□□ -1.35
NECAP1-201ENST00000339754 DEFB131AP59861 70 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 ATP5EP2Q5VTU8 51 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 ORMDL1Q9P0S3 153 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 TMEM89A2RUT3 159 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 LINC00158P58513 81 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 H7BZZ5 65 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 CCL19Q99731 98 aa6.63□□□□□ -1.35
NECAP1-201ENST00000339754 LINC00167Q96N53 147 aa6.62□□□□□ -1.35
NECAP1-201ENST00000339754 BBC3Q96PG8 261 aaPredicted RBP6.62□□□□□ -1.35
NECAP1-201ENST00000339754 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
NECAP1-201ENST00000339754 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
NECAP1-201ENST00000339754 USP24Q9UPU5 2620 aa6.62□□□□□ -1.35
NECAP1-201ENST00000339754 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
NECAP1-201ENST00000339754 LY6G6DO95868 133 aa6.61□□□□□ -1.35
NECAP1-201ENST00000339754 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.61□□□□□ -1.359e-7■■■■■ 30.3
NECAP1-201ENST00000339754 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
NECAP1-201ENST00000339754 CRYBG3Q68DQ2 2970 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 TRBV6-4A0A1B0GX49 114 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 USP9XQ93008 2570 aaPredicted RBP6.6□□□□□ -1.35
NECAP1-201ENST00000339754 ZFYVE26Q68DK2 2539 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 IGHV4-61A0A0C4DH41 118 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 IBA57-AS1B1ANH7 110 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 K7EQD1 137 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 PAX4O43316 350 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 C16orf95Q9H693 158 aa6.6□□□□□ -1.35
NECAP1-201ENST00000339754 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.36
NECAP1-201ENST00000339754 MAP1AP78559 2803 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-201ENST00000339754 DOPEY1Q5JWR5 2465 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 IGHV4-30-2A0A087WSY4 118 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 BCE1O60756 84 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 Q8N814 137 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 MYO18BQ8IUG5 2567 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 A0A096LNT2 108 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 IGHV3OR16-9A0A0B4J2B5 98 aa6.58□□□□□ -1.36
NECAP1-201ENST00000339754 FP248Q71RG6 208 aaPredicted RBP6.58□□□□□ -1.36
NECAP1-201ENST00000339754 CELSR2Q9HCU4 2923 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 J3QLI3 93 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 TMEM256-PLSCR3K7ERE1 68 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
NECAP1-201ENST00000339754 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 Q6ZTI0 123 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 ZNF843Q8N446 348 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 IL17DQ8TAD2 202 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
NECAP1-201ENST00000339754 TRGV1A0A0A0MS02 117 aa6.56□□□□□ -1.36
NECAP1-201ENST00000339754 UBE2L6O14933 153 aa6.56□□□□□ -1.36
NECAP1-201ENST00000339754 INSP01308 110 aa6.56□□□□□ -1.36
NECAP1-201ENST00000339754 SPG11Q96JI7 2443 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 TRAV10A0A0B4J240 114 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 AVPP01185 164 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 CREBBPQ92793 2442 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 A0A087WZ39 114 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
NECAP1-201ENST00000339754 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
NECAP1-201ENST00000339754 C1orf158Q8N1D5 194 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 RMI2Q96E14 147 aa6.54□□□□□ -1.36
NECAP1-201ENST00000339754 IGLV4-60A0A075B6I1 120 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms