RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HERVK_113P63121 156 aa17.71■□□□□ 0.43
SDCCAG3-201ENST00000298537 FAM19A3Q7Z5A8 133 aa17.71■□□□□ 0.43
SDCCAG3-201ENST00000298537 CLPSL2Q6UWE3 100 aa17.71■□□□□ 0.43
SDCCAG3-201ENST00000298537 NHP2Q9NX24 153 aaKnown RBP17.71■□□□□ 0.43
SDCCAG3-201ENST00000298537 A6NDN8 102 aa17.7■□□□□ 0.42
SDCCAG3-201ENST00000298537 SMAGPQ0VAQ4 97 aa17.7■□□□□ 0.42
SDCCAG3-201ENST00000298537 NANOS2P60321 138 aaKnown RBP17.68■□□□□ 0.42
SDCCAG3-201ENST00000298537 SRSF9Q13242 221 aaKnown RBP eCLIP17.68■□□□□ 0.42
SDCCAG3-201ENST00000298537 TAL2Q16559 108 aa17.68■□□□□ 0.42
SDCCAG3-201ENST00000298537 DEFB121Q5J5C9 76 aa17.68■□□□□ 0.42
SDCCAG3-201ENST00000298537 SMIM1B2RUZ4 78 aa17.67■□□□□ 0.42
SDCCAG3-201ENST00000298537 A0A0J9YXY3 114 aa17.66■□□□□ 0.42
SDCCAG3-201ENST00000298537 NDUFA12Q9UI09 145 aa17.66■□□□□ 0.42
SDCCAG3-201ENST00000298537 H3BRM9 83 aa17.66■□□□□ 0.42
SDCCAG3-201ENST00000298537 MRPL23Q16540 153 aaKnown RBP17.66■□□□□ 0.42
SDCCAG3-201ENST00000298537 C11orf68Q9H3H3 251 aaKnown RBP17.65■□□□□ 0.42
SDCCAG3-201ENST00000298537 ICOSQ9Y6W8 199 aa17.65■□□□□ 0.42
SDCCAG3-201ENST00000298537 IGLV5-39A0A0G2JS06 123 aa17.64■□□□□ 0.41
SDCCAG3-201ENST00000298537 TEX48A0A1B0GUV7 120 aa17.63■□□□□ 0.41
SDCCAG3-201ENST00000298537 IGHV3-30P01768 117 aa17.63■□□□□ 0.41
SDCCAG3-201ENST00000298537 IGHV3-30-5P0DP03 117 aa17.63■□□□□ 0.41
SDCCAG3-201ENST00000298537 LINC00959A0A1B0GUT2 108 aa17.62■□□□□ 0.41
SDCCAG3-201ENST00000298537 ZFAND6Q6FIF0 208 aa17.62■□□□□ 0.41
SDCCAG3-201ENST00000298537 A0A1B0GUV1 79 aa17.61■□□□□ 0.41
SDCCAG3-201ENST00000298537 SMIM13P0DJ93 91 aa17.61■□□□□ 0.41
SDCCAG3-201ENST00000298537 H3BUT2 72 aa17.61■□□□□ 0.41
SDCCAG3-201ENST00000298537 ADAMTSL4-AS1Q5T5F5 129 aa17.61■□□□□ 0.41
SDCCAG3-201ENST00000298537 LITAFQ99732 161 aa17.61■□□□□ 0.41
SDCCAG3-201ENST00000298537 ZNF625Q96I27 306 aaPredicted RBP17.6■□□□□ 0.41
SDCCAG3-201ENST00000298537 SPANXB1Q9NS25 103 aaPredicted RBP17.6■□□□□ 0.41
SDCCAG3-201ENST00000298537 KPRPQ5T749 579 aaPredicted RBP17.59■□□□□ 0.41
SDCCAG3-201ENST00000298537 LINC00269Q8N2A0 174 aa17.59■□□□□ 0.41
SDCCAG3-201ENST00000298537 VAMP3Q15836 100 aa17.59■□□□□ 0.41
SDCCAG3-201ENST00000298537 C5orf38Q86SI9 138 aa17.59■□□□□ 0.41
SDCCAG3-201ENST00000298537 IGHV3OR16-9A0A0B4J2B5 98 aa17.58■□□□□ 0.41
SDCCAG3-201ENST00000298537 C9orf118A6NHY6 69 aa17.58■□□□□ 0.41
SDCCAG3-201ENST00000298537 C11orf45Q8TAV5 145 aa17.58■□□□□ 0.41
SDCCAG3-201ENST00000298537 VPS25Q9BRG1 176 aa17.58■□□□□ 0.41
SDCCAG3-201ENST00000298537 XCL1P47992 114 aa17.58■□□□□ 0.4
SDCCAG3-201ENST00000298537 LYPD5Q6UWN5 251 aa17.57■□□□□ 0.4
SDCCAG3-201ENST00000298537 Q9H8V8 135 aa17.57■□□□□ 0.4
SDCCAG3-201ENST00000298537 TM2D3Q9BRN9 247 aa17.56■□□□□ 0.4
SDCCAG3-201ENST00000298537 OCIAD2Q56VL3 154 aa17.56■□□□□ 0.4
SDCCAG3-201ENST00000298537 DAND5Q8N907 189 aa17.56■□□□□ 0.4
SDCCAG3-201ENST00000298537 ANGP03950 147 aaKnown RBP17.55■□□□□ 0.4
SDCCAG3-201ENST00000298537 LELP1Q5T871 98 aa17.55■□□□□ 0.4
SDCCAG3-201ENST00000298537 NPC2P61916 151 aa17.55■□□□□ 0.4
SDCCAG3-201ENST00000298537 MUSTN1Q8IVN3 82 aa17.55■□□□□ 0.4
SDCCAG3-201ENST00000298537 SPATA25Q9BR10 227 aa17.54■□□□□ 0.4
SDCCAG3-201ENST00000298537 IGLV10-54A0A075B6I4 117 aa17.54■□□□□ 0.4
SDCCAG3-201ENST00000298537 NDUFA1O15239 70 aa17.54■□□□□ 0.4
SDCCAG3-201ENST00000298537 COL7A1Q02388 2944 aa17.53■□□□□ 0.4
SDCCAG3-201ENST00000298537 A0A0U1RRA0 63 aa17.53■□□□□ 0.4
SDCCAG3-201ENST00000298537 EIF4EBP3O60516 100 aaPredicted RBP17.53■□□□□ 0.4
SDCCAG3-201ENST00000298537 DEFB131BA0A096LNP1 70 aa17.53■□□□□ 0.4
SDCCAG3-201ENST00000298537 APOMO95445 188 aa17.53■□□□□ 0.4
SDCCAG3-201ENST00000298537 TOMM7Q9P0U1 55 aa17.52■□□□□ 0.4
SDCCAG3-201ENST00000298537 DNAH9Q9NYC9 4486 aa17.52■□□□□ 0.39
SDCCAG3-201ENST00000298537 A0A1B0GWB2 263 aa17.52■□□□□ 0.39
SDCCAG3-201ENST00000298537 DNHD1Q96M86 4753 aa17.51■□□□□ 0.39
SDCCAG3-201ENST00000298537 TMEM238C9JI98 176 aa17.51■□□□□ 0.39
SDCCAG3-201ENST00000298537 REG3AQ06141 175 aa17.5■□□□□ 0.39
SDCCAG3-201ENST00000298537 A4D1N5 150 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 A0A087WZ39 114 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 IGLL5B9A064 214 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 PRSS2P07478 247 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 CFC1BP0CG36 223 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 CFC1P0CG37 223 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 WFDC10BQ8IUB3 73 aa17.49■□□□□ 0.39
SDCCAG3-201ENST00000298537 SS18Q15532 418 aa17.48■□□□□ 0.39
SDCCAG3-201ENST00000298537 SH2D6Q7Z4S9 175 aa17.48■□□□□ 0.39
SDCCAG3-201ENST00000298537 IGHV3-33P01772 117 aa17.48■□□□□ 0.39
SDCCAG3-201ENST00000298537 A0A1W2PPM0 123 aa17.47■□□□□ 0.39
SDCCAG3-201ENST00000298537 COX7B2Q8TF08 81 aa17.47■□□□□ 0.39
SDCCAG3-201ENST00000298537 KLK12Q9UKR0 248 aa17.47■□□□□ 0.39
SDCCAG3-201ENST00000298537 ESRGQ1W209 222 aa17.46■□□□□ 0.39
SDCCAG3-201ENST00000298537 H3BNG1 76 aa17.46■□□□□ 0.38
SDCCAG3-201ENST00000298537 TMEM238LA0A1B0GVL6 79 aa17.45■□□□□ 0.38
SDCCAG3-201ENST00000298537 A6NJY4 79 aa17.45■□□□□ 0.38
SDCCAG3-201ENST00000298537 CHCHD10Q8WYQ3 142 aaPredicted RBP17.45■□□□□ 0.38
SDCCAG3-201ENST00000298537 SFTA2Q6UW10 78 aa17.44■□□□□ 0.38
SDCCAG3-201ENST00000298537 MIAQ16674 131 aa17.43■□□□□ 0.38
SDCCAG3-201ENST00000298537 SPANXDQ9BXN6 97 aa17.43■□□□□ 0.38
SDCCAG3-201ENST00000298537 PGPEP1Q9NXJ5 209 aa17.43■□□□□ 0.38
SDCCAG3-201ENST00000298537 SPANXCQ9NY87 97 aa17.43■□□□□ 0.38
SDCCAG3-201ENST00000298537 STAB2Q8WWQ8 2551 aa17.42■□□□□ 0.38
SDCCAG3-201ENST00000298537 ENHOQ6UWT2 76 aa17.41■□□□□ 0.38
SDCCAG3-201ENST00000298537 MEIG1Q5JSS6 88 aa17.4■□□□□ 0.38
SDCCAG3-201ENST00000298537 TSPAN13O95857 204 aa17.39■□□□□ 0.37
SDCCAG3-201ENST00000298537 GAGE10A6NGK3 116 aa17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 K7ERU9 68 aa17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 RPL24P83731 157 aaKnown RBP17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 CD164L2Q6UWJ8 174 aa17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 SPCS1Q9Y6A9 102 aa17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 SOSTDC1Q6X4U4 206 aa17.38■□□□□ 0.37
SDCCAG3-201ENST00000298537 TIMM17BO60830 172 aa17.37■□□□□ 0.37
SDCCAG3-201ENST00000298537 FABP2P12104 132 aa17.37■□□□□ 0.37
SDCCAG3-201ENST00000298537 C2orf82Q6UX34 121 aa17.37■□□□□ 0.37
SDCCAG3-201ENST00000298537 PRR34Q9NV39 138 aa17.37■□□□□ 0.37
SDCCAG3-201ENST00000298537 K7EP34 96 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms