RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CEND1Q8N111 149 aa15.18■□□□□ 0.02
CCDC7-201ENST00000277657 GCSHP23434 173 aa15.17■□□□□ 0.02
CCDC7-201ENST00000277657 HIST1H4GQ99525 98 aa15.17■□□□□ 0.02
CCDC7-201ENST00000277657 SMIM1B2RUZ4 78 aa15.16■□□□□ 0.02
CCDC7-201ENST00000277657 LYPD5Q6UWN5 251 aa15.16■□□□□ 0.02
CCDC7-201ENST00000277657 DEFB131BA0A096LNP1 70 aa15.16■□□□□ 0.02
CCDC7-201ENST00000277657 LINC00959A0A1B0GUT2 108 aa15.16■□□□□ 0.02
CCDC7-201ENST00000277657 FXYD2P54710 66 aa15.16■□□□□ 0.02
CCDC7-201ENST00000277657 IGKV3OR2-268A0A0C4DH90 116 aa15.15■□□□□ 0.02
CCDC7-201ENST00000277657 ZFAND6Q6FIF0 208 aa15.15■□□□□ 0.02
CCDC7-201ENST00000277657 C10orf126Q8N4M7 172 aa15.15■□□□□ 0.02
CCDC7-201ENST00000277657 A6NDN8 102 aa15.14■□□□□ 0.01
CCDC7-201ENST00000277657 SPANXB1Q9NS25 103 aaPredicted RBP15.14■□□□□ 0.01
CCDC7-201ENST00000277657 DNHD1Q96M86 4753 aa15.13■□□□□ 0.01
CCDC7-201ENST00000277657 IGHV3OR16-9A0A0B4J2B5 98 aa15.13■□□□□ 0.01
CCDC7-201ENST00000277657 NDUFA12Q9UI09 145 aa15.13■□□□□ 0.01
CCDC7-201ENST00000277657 K7EP13 123 aa15.12■□□□□ 0.01
CCDC7-201ENST00000277657 TAX1BP3O14907 124 aa15.12■□□□□ 0.01
CCDC7-201ENST00000277657 Q8N3U1 123 aa15.12■□□□□ 0.01
CCDC7-201ENST00000277657 A0A0J9YXY3 114 aa15.12■□□□□ 0.01
CCDC7-201ENST00000277657 CCL25O15444 150 aa15.11■□□□□ 0.01
CCDC7-201ENST00000277657 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC7-201ENST00000277657 SS18Q15532 418 aa15.1■□□□□ 0.01
CCDC7-201ENST00000277657 LINC00269Q8N2A0 174 aa15.1■□□□□ 0.01
CCDC7-201ENST00000277657 DNAH9Q9NYC9 4486 aa15.09■□□□□ 0.01
CCDC7-201ENST00000277657 NDUFA1O15239 70 aa15.09■□□□□ 0.01
CCDC7-201ENST00000277657 PTTG1IPP53801 180 aa15.09■□□□□ 0.01
CCDC7-201ENST00000277657 Q6ZVH6 145 aa15.09■□□□□ 0.01
CCDC7-201ENST00000277657 COX11Q9Y6N1 276 aa15.09■□□□□ 0.01
CCDC7-201ENST00000277657 A0A087WZ39 114 aa15.08■□□□□ 0.01
CCDC7-201ENST00000277657 ANGP03950 147 aaKnown RBP15.08■□□□□ 0.01
CCDC7-201ENST00000277657 TRAV10A0A0B4J240 114 aa15.08■□□□□ 0
CCDC7-201ENST00000277657 CLPSL2Q6UWE3 100 aa15.08■□□□□ 0
CCDC7-201ENST00000277657 IGHV3-30P01768 117 aa15.06■□□□□ 0
CCDC7-201ENST00000277657 IGHV3-30-5P0DP03 117 aa15.06■□□□□ 0
CCDC7-201ENST00000277657 REG3AQ06141 175 aa15.06■□□□□ 0
CCDC7-201ENST00000277657 LITAFQ99732 161 aa15.06■□□□□ 0
CCDC7-201ENST00000277657 TMEM238C9JI98 176 aa15.06■□□□□ 0
CCDC7-201ENST00000277657 XCL1P47992 114 aa15.04■□□□□ -0
CCDC7-201ENST00000277657 ESRGQ1W209 222 aa15.04■□□□□ -0
CCDC7-201ENST00000277657 ZNF625Q96I27 306 aaPredicted RBP15.04■□□□□ -0
CCDC7-201ENST00000277657 B9D2Q9BPU9 175 aa15.04■□□□□ -0
CCDC7-201ENST00000277657 SMIM13P0DJ93 91 aa15.03■□□□□ -0
CCDC7-201ENST00000277657 Q9H8V8 135 aa15.03■□□□□ -0
CCDC7-201ENST00000277657 PRR34Q9NV39 138 aa15.03■□□□□ -0
CCDC7-201ENST00000277657 NHP2Q9NX24 153 aaKnown RBP15.03■□□□□ -0
CCDC7-201ENST00000277657 COL7A1Q02388 2944 aa15.03■□□□□ -0
CCDC7-201ENST00000277657 C5orf38Q86SI9 138 aa15.03■□□□□ -0
CCDC7-201ENST00000277657 A0A1B0GWB2 263 aa15.02■□□□□ -0
CCDC7-201ENST00000277657 TIMM17BO60830 172 aa15.02■□□□□ -0
CCDC7-201ENST00000277657 CD164L2Q6UWJ8 174 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 WFDC10BQ8IUB3 73 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 LINC01561Q8N1V8 128 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 TMEM238LA0A1B0GVL6 79 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 A6NJY4 79 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 K7ERJ3 54 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 COX7B2Q8TF08 81 aa15.01□□□□□ -0.01
CCDC7-201ENST00000277657 CHCHD10Q8WYQ3 142 aaPredicted RBP15.01□□□□□ -0.01
CCDC7-201ENST00000277657 C15orf53Q8NAA6 179 aa15□□□□□ -0.01
CCDC7-201ENST00000277657 SPANXDQ9BXN6 97 aa15□□□□□ -0.01
CCDC7-201ENST00000277657 SPANXCQ9NY87 97 aa15□□□□□ -0.01
CCDC7-201ENST00000277657 ADAMTSL4-AS1Q5T5F5 129 aa14.99□□□□□ -0.01
CCDC7-201ENST00000277657 KLK12Q9UKR0 248 aa14.99□□□□□ -0.01
CCDC7-201ENST00000277657 C9orf118A6NHY6 69 aa14.99□□□□□ -0.01
CCDC7-201ENST00000277657 HERV-K104P63124 156 aa14.98□□□□□ -0.01
CCDC7-201ENST00000277657 RAB37Q96AX2 223 aa14.98□□□□□ -0.01
CCDC7-201ENST00000277657 ENHOQ6UWT2 76 aa14.97□□□□□ -0.01
CCDC7-201ENST00000277657 IGLV10-54A0A075B6I4 117 aa14.97□□□□□ -0.01
CCDC7-201ENST00000277657 IGHV3-33P01772 117 aa14.97□□□□□ -0.01
CCDC7-201ENST00000277657 MIAQ16674 131 aa14.96□□□□□ -0.01
CCDC7-201ENST00000277657 MUSTN1Q8IVN3 82 aa14.96□□□□□ -0.01
CCDC7-201ENST00000277657 TOMM7Q9P0U1 55 aa14.95□□□□□ -0.02
CCDC7-201ENST00000277657 STAB2Q8WWQ8 2551 aa14.95□□□□□ -0.02
CCDC7-201ENST00000277657 COX7A2LO14548 114 aa14.95□□□□□ -0.02
CCDC7-201ENST00000277657 FOXI1Q12951 378 aa14.95□□□□□ -0.02
CCDC7-201ENST00000277657 CIRBPQ14011 172 aaKnown RBP14.95□□□□□ -0.02
CCDC7-201ENST00000277657 FBN3Q75N90 2809 aa14.94□□□□□ -0.02
CCDC7-201ENST00000277657 RPL24P83731 157 aaKnown RBP14.93□□□□□ -0.02
CCDC7-201ENST00000277657 A4D1N5 150 aa14.92□□□□□ -0.02
CCDC7-201ENST00000277657 H3BUT2 72 aa14.92□□□□□ -0.02
CCDC7-201ENST00000277657 LINC01556Q5JQF7 62 aa14.92□□□□□ -0.02
CCDC7-201ENST00000277657 Q8IZM0 81 aa14.92□□□□□ -0.02
CCDC7-201ENST00000277657 TRAV8-4A0A0B4J246 113 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 PRSS2P07478 247 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 CFC1BP0CG36 223 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 CFC1P0CG37 223 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 CRPP02741 224 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 SFTA2Q6UW10 78 aa14.91□□□□□ -0.02
CCDC7-201ENST00000277657 GAGE12HA6NDE8 117 aa14.9□□□□□ -0.02
CCDC7-201ENST00000277657 IFITM1P13164 125 aa14.9□□□□□ -0.02
CCDC7-201ENST00000277657 UBE2WQ96B02 151 aa14.9□□□□□ -0.02
CCDC7-201ENST00000277657 NAA38Q9BRA0 125 aaKnown RBP14.9□□□□□ -0.02
CCDC7-201ENST00000277657 IGLL5B9A064 214 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 NHLRC4P0CG21 123 aaPredicted RBP14.89□□□□□ -0.03
CCDC7-201ENST00000277657 VAMP3Q15836 100 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 MEIG1Q5JSS6 88 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 APOMO95445 188 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 C6orf226Q5I0X4 101 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 DAND5Q8N907 189 aa14.89□□□□□ -0.03
CCDC7-201ENST00000277657 MALP21145 153 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms