RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 DOCK2Q92608 1830 aa-0.2□□□□□ -2.44
CDR1-202ENST00000625883 LRRC37A2A6NM11 1700 aa-0.2□□□□□ -2.44
CDR1-202ENST00000625883 KRTAP6-1Q3LI64 71 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 TMEM170BQ5T4T1 132 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 BAGE2Q86Y30 109 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 Q8IZM0 81 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 C8orf59Q8N0T1 100 aaPredicted RBP-0.21□□□□□ -2.44
CDR1-202ENST00000625883 DYNLRB1Q9NP97 96 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 KMT2AQ03164 3969 aa-0.21□□□□□ -2.44
CDR1-202ENST00000625883 ROCK2O75116 1388 aaKnown RBP-0.21□□□□□ -2.44
CDR1-202ENST00000625883 F8VRH5 84 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 AKAIN1P0CW23 69 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 C5orf38Q86SI9 138 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 PP6455Q8WZ26 134 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 LINC00474Q9P2X8 69 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 ERCC6L2Q5T890 1561 aa-0.22□□□□□ -2.44
CDR1-202ENST00000625883 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.22□□□□□ -2.44
CDR1-202ENST00000625883 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 DOPEY2Q9Y3R5 2298 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 QRICH2Q9H0J4 1663 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 IGLC7A0M8Q6 106 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 OOSP1A8MZH6 123 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 UQCR11O14957 56 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 COX17Q14061 63 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 COMMD6Q7Z4G1 85 aa-0.22□□□□□ -2.45
CDR1-202ENST00000625883 PKD1L1Q8TDX9 2849 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 I3L2K1 104 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 SSSCA1O60232 199 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 IFNGP01579 166 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 DEFB109BQ30KR1 87 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 Q5VSD8 79 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 RPL13AP3Q6NVV1 102 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 TP53AIP1Q9HCN2 124 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 LINC01558Q9Y6Z2 57 aa-0.23□□□□□ -2.45
CDR1-202ENST00000625883 HSPG2P98160 4391 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 KIF21AQ7Z4S6 1674 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 RIMS1Q86UR5 1692 aaKnown RBP-0.24□□□□□ -2.45
CDR1-202ENST00000625883 A2ML1A8K2U0 1454 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 HMGN4O00479 90 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 S100A3P33764 101 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 Q6JHZ5 121 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
CDR1-202ENST00000625883 PPRC1Q5VV67 1664 aaKnown RBP-0.24□□□□□ -2.45
CDR1-202ENST00000625883 VWFP04275 2813 aa-0.25□□□□□ -2.45
CDR1-202ENST00000625883 TPPP2P59282 170 aa-0.25□□□□□ -2.45
CDR1-202ENST00000625883 MYCBP2O75592 4640 aa-0.25□□□□□ -2.45
CDR1-202ENST00000625883 NEBP20929 6669 aa-0.25□□□□□ -2.45
CDR1-202ENST00000625883 ROBO1Q9Y6N7 1651 aa-0.26□□□□□ -2.45
CDR1-202ENST00000625883 SPRR1AP35321 89 aa-0.26□□□□□ -2.45
CDR1-202ENST00000625883 MRPL54Q6P161 138 aaKnown RBP-0.26□□□□□ -2.45
CDR1-202ENST00000625883 FLNAP21333 2647 aaKnown RBP-0.26□□□□□ -2.45
CDR1-202ENST00000625883 APOC3P02656 99 aa-0.27□□□□□ -2.45
CDR1-202ENST00000625883 GVINP1Q7Z2Y8 2422 aa-0.27□□□□□ -2.45
CDR1-202ENST00000625883 C10orf71Q711Q0 1435 aa-0.27□□□□□ -2.45
CDR1-202ENST00000625883 KTN1Q86UP2 1357 aaKnown RBP-0.27□□□□□ -2.45
CDR1-202ENST00000625883 LPAP08519 4548 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 A0A1B0GV90 55 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 EFCAB10A6NFE3 127 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 TNFP01375 233 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 C9orf153Q5TBE3 101 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 PIEZO2Q9H5I5 2752 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 SHROOM2Q13796 1616 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 SPTBN1Q01082 2364 aaKnown RBP-0.28□□□□□ -2.45
CDR1-202ENST00000625883 PSME4Q14997 1843 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 SBF2Q86WG5 1849 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 TNXBP22105 4242 aa-0.28□□□□□ -2.45
CDR1-202ENST00000625883 LOC285095A0A1B0GVY8 99 aa-0.29□□□□□ -2.46
CDR1-202ENST00000625883 DLEU1O43261 78 aa-0.29□□□□□ -2.46
CDR1-202ENST00000625883 USF3Q68DE3 2245 aa-0.29□□□□□ -2.46
CDR1-202ENST00000625883 SFT2D2O95562 160 aa-0.29□□□□□ -2.46
CDR1-202ENST00000625883 MYOZ3Q8TDC0 251 aa-0.29□□□□□ -2.46
CDR1-202ENST00000625883 PCLOQ9Y6V0 5065 aa-0.3□□□□□ -2.46
CDR1-202ENST00000625883 CHKB-CPT1BH3BT56 60 aa-0.3□□□□□ -2.46
CDR1-202ENST00000625883 DPH3P1Q9H4G8 78 aa-0.3□□□□□ -2.46
CDR1-202ENST00000625883 LRP2P98164 4655 aa-0.3□□□□□ -2.46
CDR1-202ENST00000625883 KMT2CQ8NEZ4 4911 aaKnown RBP-0.31□□□□□ -2.46
CDR1-202ENST00000625883 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
CDR1-202ENST00000625883 FAT2Q9NYQ8 4349 aa-0.31□□□□□ -2.46
CDR1-202ENST00000625883 TRBV6-1A0A0K0K1D8 114 aa-0.31□□□□□ -2.46
CDR1-202ENST00000625883 SNAPC5O75971 98 aa-0.31□□□□□ -2.46
CDR1-202ENST00000625883 DCDP81605 110 aaKnown RBP-0.31□□□□□ -2.46
CDR1-202ENST00000625883 NALCNQ8IZF0 1738 aa-0.31□□□□□ -2.46
CDR1-202ENST00000625883 MYOM1P52179 1685 aa-0.32□□□□□ -2.46
CDR1-202ENST00000625883 FXYD6-FXYD2A0A087WZ82 144 aa-0.32□□□□□ -2.46
CDR1-202ENST00000625883 UBE2L5PA0A1B0GUS4 154 aa-0.32□□□□□ -2.46
CDR1-202ENST00000625883 UBE2L3P68036 154 aaKnown RBP-0.32□□□□□ -2.46
CDR1-202ENST00000625883 CDC42SE2Q9NRR3 84 aa-0.32□□□□□ -2.46
CDR1-202ENST00000625883 CUL7Q14999 1698 aa-0.32□□□□□ -2.46
CDR1-202ENST00000625883 PAPPAQ13219 1627 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 MYO7BQ6PIF6 2116 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 ATRQ13535 2644 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 PRM1P04553 51 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 SPRR2DP22532 72 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 PIGYQ3MUY2 71 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 MYOM2P54296 1465 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 STAB1Q9NY15 2570 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 NSD3Q9BZ95 1437 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 HECTD4Q9Y4D8 3996 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 DOPEY1Q5JWR5 2465 aa-0.33□□□□□ -2.46
CDR1-202ENST00000625883 ZANQ9Y493 2812 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms