RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 CKS1BP61024 79 aa4.12□□□□□ -1.75
CTNS-210ENST00000576979 RBMY1FQ15415 496 aaKnown RBP4.12□□□□□ -1.75
CTNS-210ENST00000576979 C4orf3Q8WVX3 66 aa4.12□□□□□ -1.75
CTNS-210ENST00000576979 Q9H8V8 135 aa4.12□□□□□ -1.75
CTNS-210ENST00000576979 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
CTNS-210ENST00000576979 LRBAP50851 2863 aa4.12□□□□□ -1.75
CTNS-210ENST00000576979 A0A096LNT2 108 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 TRBV30A0A0K0K1B3 111 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 RS1O15537 224 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 TIMM17BO60830 172 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 IGHV3-53P01767 116 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 PRSS2P07478 247 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 IGHV4-31P0DP07 118 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 IFITM1P13164 125 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 PROK1P58294 105 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 CIRBPQ14011 172 aaKnown RBP4.11□□□□□ -1.75
CTNS-210ENST00000576979 MIAQ16674 131 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 DEFB136Q30KP8 78 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 LINC01620Q4KN68 170 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 Q6ZUT4 128 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 COPS9Q8WXC6 57 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 NRGNQ92686 78 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 CHCHD7Q9BUK0 85 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 MAP6D1Q9H9H5 199 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 UBE2D4Q9Y2X8 147 aa4.11□□□□□ -1.75
CTNS-210ENST00000576979 ATMQ13315 3056 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 TRAV8-3A0A0A6YYJ7 113 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 IGKV2-29A2NJV5 120 aaPredicted RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 HERVK_113P63121 156 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 RNASE13Q5GAN3 156 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 TMEM61Q8N0U2 210 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 TEX29Q8N6K0 151 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 MAPK1IP1LQ8NDC0 245 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 SPATA3Q8NHX4 192 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 ICOSQ9Y6W8 199 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 DCHS2Q6V1P9 2916 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 SMG1Q96Q15 3661 aaKnown RBP4.1□□□□□ -1.75
CTNS-210ENST00000576979 DMXL2Q8TDJ6 3036 aa4.1□□□□□ -1.75
CTNS-210ENST00000576979 KALRNO60229 2985 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 IGHV3-38A0A0C4DH36 116 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 GAGE12JA6NER3 117 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 H3BT86 120 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 RPL13AP40429 203 aaKnown RBP4.09□□□□□ -1.75
CTNS-210ENST00000576979 CMC4P56277 68 aaPredicted RBP4.09□□□□□ -1.75
CTNS-210ENST00000576979 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
CTNS-210ENST00000576979 ZFAND6Q6FIF0 208 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 CEMP1Q6PRD7 247 aaPredicted RBP4.09□□□□□ -1.75
CTNS-210ENST00000576979 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 Q75L30 129 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 LRRC75A-AS1Q8N1F1 130 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 Q8N2B8 174 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
CTNS-210ENST00000576979 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 CFAP47Q6ZTR5 3102 aa4.09□□□□□ -1.75
CTNS-210ENST00000576979 TACC2O95359 2948 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 TRGV1A0A0A0MS02 117 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 NDUFA1O15239 70 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 ANKRD17O75179 2603 aaKnown RBP4.08□□□□□ -1.76
CTNS-210ENST00000576979 SNCGO76070 127 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 MT-ATP8P03928 68 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 XGP55808 180 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 NPC2P61916 151 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 DEFB114Q30KQ6 69 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 DEFB113Q30KQ7 82 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 C2orf82Q6UX34 121 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 TMEM86BQ8N661 226 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 C11orf72Q8NBR9 251 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 LINC01600Q96MT4 127 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 LITAFQ99732 161 aa4.08□□□□□ -1.76
CTNS-210ENST00000576979 SPTBN4Q9H254 2564 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 IGLV5-45A0A087WSX0 123 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 TRBV10-1A0A0K0K1A3 114 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 K7EQD1 137 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 UBE2L6O14933 153 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 HERV-K104P63124 156 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 MEIG1Q5JSS6 88 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 FAM104AQ969W3 186 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 TMEM101Q96IK0 257 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 XCL2Q9UBD3 114 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 CDKN2A-AS1Q9UH64 79 aa4.07□□□□□ -1.76
CTNS-210ENST00000576979 TRAV4A0A0B4J268 109 aa4.06□□□□□ -1.76
CTNS-210ENST00000576979 LST1O00453 97 aa4.06□□□□□ -1.76
CTNS-210ENST00000576979 PRM2P04554 102 aa4.06□□□□□ -1.76
CTNS-210ENST00000576979 NHLRC4P0CG21 123 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms