RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 BORCS7-ASMTA0A0B4J1R7 106 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 A0A1B0GV72 72 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 HCG22E2RYF7 251 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 E5RI56 91 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 APOC4-APOC2K7ER74 178 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 NPFFO15130 113 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 PPP1R17O96001 155 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 RBP4P02753 201 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 S100GP29377 79 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 SPANXN1Q5VSR9 72 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 Q6ZUT4 128 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 AMELXQ99217 191 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 DDA1Q9BW61 102 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 RPRMQ9NS64 109 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 GINS2Q9Y248 185 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 NSD3Q9BZ95 1437 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 IQSEC2Q5JU85 1478 aa-0.41□□□□□ -2.48
FOXN3-216ENST00000557496 DNAH8Q96JB1 4490 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 PAPPA2Q9BXP8 1791 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 PDE4DIPQ5VU43 2346 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CCDC168Q8NDH2 2452 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 HMGXB3Q12766 1538 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 IL5P05113 134 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 COX6B1P14854 86 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CBLN1P23435 193 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CCL8P80075 99 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 DCDP81605 110 aaKnown RBP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 PLECQ15149 4684 aaKnown RBP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 MORN2Q502X0 79 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 Q6JHZ5 121 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 ZNF818PQ6ZRF7 136 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 DEFB123Q8N688 67 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 TSLPQ969D9 159 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 LSM10Q969L4 123 aaKnown RBP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 FXYD6Q9H0Q3 95 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CENPHQ9H3R5 247 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CRIPTQ9P021 101 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 SCP2D1Q9UJQ7 156 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 PRG4Q92954 1404 aaPredicted RBP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 ARHGEF5Q12774 1597 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 PHLPP1O60346 1717 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 MARF1Q9Y4F3 1742 aaKnown RBP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 ACACAQ13085 2346 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 NBEAL2Q6ZNJ1 2754 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 TEX15Q9BXT5 2789 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 WDR7Q9Y4E6 1490 aa-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 NIPBLQ6KC79 2804 aaeCLIP-0.42□□□□□ -2.48
FOXN3-216ENST00000557496 CMYA5Q8N3K9 4069 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 RIMS1Q86UR5 1692 aaKnown RBP-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 ROBO1Q9Y6N7 1651 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 ANKRD11Q6UB99 2663 aaPredicted RBP-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 GCN1Q92616 2671 aaKnown RBP-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 LRRK2Q5S007 2527 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 CTXND1A0A1B0GTU2 59 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 LINC00959A0A1B0GUT2 108 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SPAARA0A1B0GVQ0 90 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 PFDN1O60925 122 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SIX6O95475 246 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 TSPAN19P0C672 248 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 NCS1P62166 190 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 PIGYQ3MUY2 71 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 C10orf128Q5T292 105 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 Q6AWC8 147 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 DEFB105AQ8NG35 78 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SPRR2FQ96RM1 72 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SEC11CQ9BY50 192 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SMIM3Q9BZL3 60 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 WDR87Q6ZQQ6 2873 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 USP9XQ93008 2570 aaPredicted RBP-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SHROOM2Q13796 1616 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 NBEAQ8NFP9 2946 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 PXDNQ92626 1479 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 DSPP15924 2871 aaKnown RBP-0.43□□□□□ -2.48
FOXN3-216ENST00000557496 TMEM2Q9UHN6 1383 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 OVOS2A0A0J9YW53 1432 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 DISP2A7MBM2 1401 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 OVOS2Q6IE36 1432 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 KIAA0556O60303 1618 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 TRAV13-2A0A0B4J235 113 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 GNG14A0A1W2PPG7 69 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 IGLC7A0M8Q6 106 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 TSTD3H0UI37 97 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 H0YJX3 145 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 ARPC5O15511 151 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 YPEL1O60688 119 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 SNCGO76070 127 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 NDUFB6O95139 128 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 IFNA17P01571 189 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 HIST1H1DP16402 221 aaKnown RBP-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 CKS1BP61024 79 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 ALX1Q15699 326 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 CCDC153Q494R4 210 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 TMEM170BQ5T4T1 132 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 LELP1Q5T871 98 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 RPL7L1Q6DKI1 246 aaKnown RBP-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 CTAGE3PQ8IX95 158 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 TTC9CQ8N5M4 171 aa-0.44□□□□□ -2.48
FOXN3-216ENST00000557496 Q8N8P6 123 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms