RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 LENEPQ9Y5L5 61 aa1.9□□□□□ -2.1
KTN1-220ENST00000555172 V9GYH0 126 aa1.9□□□□□ -2.1
KTN1-220ENST00000555172 MED13LQ71F56 2210 aa1.9□□□□□ -2.11
KTN1-220ENST00000555172 DLEC1Q9Y238 1755 aa1.9□□□□□ -2.11
KTN1-220ENST00000555172 UGGT2Q9NYU1 1516 aa1.9□□□□□ -2.11
KTN1-220ENST00000555172 IGLV3-32A0A0A0MS00 114 aa1.9□□□□□ -2.11
KTN1-220ENST00000555172 LINC00322Q6ZN03 302 aaPredicted RBP1.9□□□□□ -2.11
KTN1-220ENST00000555172 PXDNQ92626 1479 aa1.9□□□□□ -2.11
KTN1-220ENST00000555172 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.11
KTN1-220ENST00000555172 UBR1Q8IWV7 1749 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 MRC1P22897 1456 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 M0R135 149 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 PSMG4Q5JS54 123 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 LINC01600Q96MT4 127 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 KDM6BO15054 1643 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 HMGXB3Q12766 1538 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 ANKARQ7Z5J8 1434 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 ABCA1O95477 2261 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 DNAJC13O75165 2243 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 UNC13BO14795 1591 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 IGKV2-40A0A087WW87 121 aaPredicted RBP1.89□□□□□ -2.11
KTN1-220ENST00000555172 IGKV2D-40P01614 121 aaPredicted RBP1.89□□□□□ -2.11
KTN1-220ENST00000555172 SMIM11AP58511 58 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 C5orf56Q8N8D9 126 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 S100ZQ8WXG8 99 aa1.89□□□□□ -2.11
KTN1-220ENST00000555172 IQGAP3Q86VI3 1631 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.88□□□□□ -2.11
KTN1-220ENST00000555172 CLTCQ00610 1675 aaKnown RBP1.88□□□□□ -2.11
KTN1-220ENST00000555172 C7orf77A4D0Y5 90 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 F8VRH5 84 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 FXYD1O00168 92 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 ACYP1P07311 99 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 SMIM13P0DJ93 91 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 DEFB132Q7Z7B7 95 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
KTN1-220ENST00000555172 ZNF142P52746 1687 aaPredicted RBP1.88□□□□□ -2.11
KTN1-220ENST00000555172 LTN1O94822 1766 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 RREB1Q92766 1687 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 INE1O15225 51 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 BCE1O60756 84 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 HMGN2P05204 90 aaKnown RBP1.87□□□□□ -2.11
KTN1-220ENST00000555172 CCL18P55774 89 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 V9GYV3 84 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 MYO7AQ13402 2215 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 FANCAO15360 1455 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 MADDQ8WXG6 1647 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 STRCP1A6NGW2 1772 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 COL5A3P25940 1745 aaPredicted RBP1.87□□□□□ -2.11
KTN1-220ENST00000555172 FAM74A4Q5TZK3 123 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 GBF1Q92538 1859 aa1.87□□□□□ -2.11
KTN1-220ENST00000555172 ARHGEF5Q12774 1597 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 TRGV2A0A075B6R0 118 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
KTN1-220ENST00000555172 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 LOC285095A0A1B0GVY8 99 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 PRB2P02812 416 aaPredicted RBP1.86□□□□□ -2.11
KTN1-220ENST00000555172 SAA2P0DJI9 122 aaPredicted RBP1.86□□□□□ -2.11
KTN1-220ENST00000555172 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 R4GMQ9 66 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 CACNA1GO43497 2377 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 PPRC1Q5VV67 1664 aaKnown RBP1.86□□□□□ -2.11
KTN1-220ENST00000555172 MYO5CQ9NQX4 1742 aa1.86□□□□□ -2.11
KTN1-220ENST00000555172 MYO3AQ8NEV4 1616 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 LEPROTL1O95214 131 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 ARMS2P0C7Q2 107 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 HMGN3Q15651 99 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 OBSCN-AS1Q96MR7 158 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 Q96NJ1 140 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 ZFHX3Q15911 3703 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 PEAK1Q9H792 1746 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 MAGI3Q5TCQ9 1506 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 ABCA8O94911 1581 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 MYMXA0A1B0GTQ4 84 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 M0R2N4 97 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 Q86TA4 180 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 ZNF563Q8TA94 476 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 WFDC6Q9BQY6 131 aa1.85□□□□□ -2.11
KTN1-220ENST00000555172 ZNF236Q9UL36 1845 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 KIF21AQ7Z4S6 1674 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 NCOA2Q15596 1464 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 AFDNP55196 1824 aaKnown RBP1.84□□□□□ -2.11
KTN1-220ENST00000555172 A0A087WVE0 104 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 CTXND1A0A1B0GTU2 59 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 A0A1B0GWA3 101 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 HCRTO43612 131 aa1.84□□□□□ -2.11
KTN1-220ENST00000555172 PHRF1Q9P1Y6 1649 aaKnown RBP1.84□□□□□ -2.12
KTN1-220ENST00000555172 MAP3K4Q9Y6R4 1608 aa1.84□□□□□ -2.12
KTN1-220ENST00000555172 BLMP54132 1417 aaPredicted RBP1.84□□□□□ -2.12
KTN1-220ENST00000555172 NCOA6Q14686 2063 aaPredicted RBP1.84□□□□□ -2.12
KTN1-220ENST00000555172 LAMA4Q16363 1823 aa1.84□□□□□ -2.12
KTN1-220ENST00000555172 EHBP1L1Q8N3D4 1523 aa1.84□□□□□ -2.12
KTN1-220ENST00000555172 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 UMAD1C9J7I0 102 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 D6R8Y8 96 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 C6orf201Q7Z4U5 140 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 MUSTN1Q8IVN3 82 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 TNRC6BQ9UPQ9 1833 aaKnown RBP1.83□□□□□ -2.12
KTN1-220ENST00000555172 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 IGKV4-1P06312 121 aa1.83□□□□□ -2.12
KTN1-220ENST00000555172 ZNF137PP52743 207 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms