RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 CSMD1Q96PZ7 3565 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 SPG11Q96JI7 2443 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 TRIAP1O43715 76 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 PF4P02776 101 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 PRM2P04554 102 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 CR1P17927 2039 aa9.34□□□□□ -0.91
CPSF7-223ENST00000544669 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-223ENST00000544669 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 Q6ZTI0 123 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-223ENST00000544669 Q9H8V8 135 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 Q9UF83 564 aa9.33□□□□□ -0.92
CPSF7-223ENST00000544669 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
CPSF7-223ENST00000544669 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
CPSF7-223ENST00000544669 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
CPSF7-223ENST00000544669 NOP10Q9NPE3 64 aaKnown RBP9.32□□□□□ -0.92
CPSF7-223ENST00000544669 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 LST1O00453 97 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 NDUFA7O95182 113 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
CPSF7-223ENST00000544669 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 GAGE4Q13068 117 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 GAGE5Q13069 117 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 UBE2WQ96B02 151 aa9.31□□□□□ -0.92
CPSF7-223ENST00000544669 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
CPSF7-223ENST00000544669 PIEZO1Q92508 2521 aa9.3□□□□□ -0.92
CPSF7-223ENST00000544669 TRGV4A0A0C4DH28 118 aa9.3□□□□□ -0.92
CPSF7-223ENST00000544669 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
CPSF7-223ENST00000544669 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
CPSF7-223ENST00000544669 COX6A2Q02221 97 aa9.29□□□□□ -0.92
CPSF7-223ENST00000544669 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
CPSF7-223ENST00000544669 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-223ENST00000544669 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 TRAV8-4A0A0B4J246 113 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 FAM240AA0A1B0GVK7 77 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-223ENST00000544669 ESM1Q9NQ30 184 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 COX7A2LO14548 114 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 CKS1BP61024 79 aa9.28□□□□□ -0.92
CPSF7-223ENST00000544669 USP9XQ93008 2570 aaPredicted RBP9.27□□□□□ -0.92
CPSF7-223ENST00000544669 A8MZ25 164 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 F5H768 121 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 SNCGO76070 127 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE7O76087 117 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 ACYP1P07311 99 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
CPSF7-223ENST00000544669 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
CPSF7-223ENST00000544669 HILS1P60008 231 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-223ENST00000544669 C11orf44Q8N8P7 122 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 TRBV6-8A0A0A6YYG3 113 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 TRACP01848 142 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-223ENST00000544669 XGP55808 180 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 Q6Q795 121 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
CPSF7-223ENST00000544669 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
CPSF7-223ENST00000544669 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
CPSF7-223ENST00000544669 ACACBO00763 2458 aa9.25□□□□□ -0.93
CPSF7-223ENST00000544669 NPC2P61916 151 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 IGSF10Q6WRI0 2623 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 HIST2H2BCQ6DN03 193 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 HIST2H2BDQ6DRA6 164 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
CPSF7-223ENST00000544669 CREBBPQ92793 2442 aa9.23□□□□□ -0.93
CPSF7-223ENST00000544669 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
CPSF7-223ENST00000544669 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
CPSF7-223ENST00000544669 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
CPSF7-223ENST00000544669 IBA57-AS1B1ANH7 110 aa9.22□□□□□ -0.93
CPSF7-223ENST00000544669 FHL2Q14192 279 aa9.22□□□□□ -0.93
CPSF7-223ENST00000544669 TEX49A0A1B0GTD5 131 aa9.21□□□□□ -0.93
CPSF7-223ENST00000544669 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.93
CPSF7-223ENST00000544669 SORL1Q92673 2214 aa9.21□□□□□ -0.93
CPSF7-223ENST00000544669 A0A087WZ39 114 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 CRPP02741 224 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 DAND5Q8N907 189 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 CLEC2BQ92478 149 aa9.21□□□□□ -0.94
CPSF7-223ENST00000544669 USP9YO00507 2555 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms