RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TCEAL4Q96EI5 215 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 IFT140Q96RY7 1462 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 SEC11CQ9BY50 192 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 WNK3Q9BYP7 1800 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 PKDREJQ9NTG1 2253 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 COPZ2Q9P299 210 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 PTPRQQ9UMZ3 2332 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 DNAH7Q8WXX0 4024 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 ITPR1Q14643 2758 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 CCDC168Q8NDH2 2452 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 PRKDCP78527 4128 aaKnown RBP-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 ZNF518AQ6AHZ1 1483 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 TACC2O95359 2948 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 CASKIN1Q8WXD9 1431 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 MAP1AP78559 2803 aaPredicted RBP-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 PIGBOS1A0A0B4J2F0 54 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 BCE1O60756 84 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 PPP1R17O96001 155 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 PRM1P04553 51 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 TSTD1Q8NFU3 115 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 AKAP6Q13023 2319 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 CFAP46Q8IYW2 2715 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 KDM3BQ7LBC6 1761 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 PKD1P98161 4303 aa-0.52□□□□□ -2.49
CCDC7-208ENST00000537047 MUC17Q685J3 4493 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 COPZ1P61923 177 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 RPS25P62851 125 aaKnown RBP-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 TMEM191AQ9H0A3 160 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 TPT1P8Q9HAU6 139 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 PLXNB2O15031 1838 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 DMXL2Q8TDJ6 3036 aa-0.53□□□□□ -2.49
CCDC7-208ENST00000537047 NBEAQ8NFP9 2946 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 GCN1Q92616 2671 aaKnown RBP-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 CEP295Q9C0D2 2601 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 NWD2Q9ULI1 1742 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 SPAARA0A1B0GVQ0 90 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 M0R135 149 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 SPRR2EP22531 72 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 SPRR2BP35325 72 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 SPRR2AP35326 72 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 HAMPP81172 84 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 DCDP81605 110 aaKnown RBP-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 AQP10Q96PS8 301 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 TP53AIP1Q9HCN2 124 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 CCDC167Q9P0B6 97 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 ALMS1Q8TCU4 4167 aa-0.54□□□□□ -2.5
CCDC7-208ENST00000537047 LRP6O75581 1613 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 CTXND1A0A1B0GTU2 59 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 HCG22E2RYF7 251 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 SMCO1Q147U7 214 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 ANP32BQ92688 251 aaKnown RBP-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 SDF2Q99470 211 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 ERCC6L2Q5T890 1561 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 PIEZO2Q9H5I5 2752 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 DNAH1Q9P2D7 4330 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 C10orf71Q711Q0 1435 aa-0.55□□□□□ -2.5
CCDC7-208ENST00000537047 PCNX1Q96RV3 2341 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 TRAV13-2A0A0B4J235 113 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 SMIM21Q3B7S5 101 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 C10orf128Q5T292 105 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 MAFIPQ8WZ33 124 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 DPH3Q96FX2 82 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 MTORP42345 2549 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 LRRC37A2A6NM11 1700 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 PRDM2Q13029 1718 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 BCL9LQ86UU0 1499 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 APC2O95996 2303 aa-0.56□□□□□ -2.5
CCDC7-208ENST00000537047 CSMD2Q7Z408 3487 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 ANK3Q12955 4377 aaKnown RBP-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 CHD7Q9P2D1 2997 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 C2CD3Q4AC94 2353 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 CEP152O94986 1710 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 PKHD1P08F94 4074 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 COX17Q14061 63 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 SPAG11AQ6PDA7 123 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 COPS9Q8WXC6 57 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 AGPAT4-IT1Q9H0P7 198 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 LENEPQ9Y5L5 61 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 MRC1P22897 1456 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 SRCAPQ6ZRS2 3230 aa-0.57□□□□□ -2.5
CCDC7-208ENST00000537047 ZFHX3Q15911 3703 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 VPS13BQ7Z7G8 4022 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 I3L2K1 104 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 PIGYQ3MUY2 71 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 C12orf73Q69YU5 71 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 LAMC1P11047 1609 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 MYH8P13535 1937 aa-0.58□□□□□ -2.5
CCDC7-208ENST00000537047 TRIOO75962 3097 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 FXYD6-FXYD2A0A087WZ82 144 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 TRBV6-1A0A0K0K1D8 114 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 TMEM170BQ5T4T1 132 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 TTC9CQ8N5M4 171 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 V9GYH0 126 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 MYO9AB2RTY4 2548 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 MXRA5Q9NR99 2828 aa-0.59□□□□□ -2.5
CCDC7-208ENST00000537047 TLN2Q9Y4G6 2542 aa-0.6□□□□□ -2.5
CCDC7-208ENST00000537047 K7EQZ3 153 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 RBM3P98179 157 aaKnown RBP-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 AMELXQ99217 191 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms