RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PPDPFQ9H3Y8 114 aa6.29□□□□□ -1.4
CDC42SE1-204ENST00000483763 IGLV4-69A0A075B6H9 119 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 TRGV2A0A075B6R0 118 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 TRAV4A0A0B4J268 109 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 PRB2P02812 416 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 GAGE12HA6NDE8 117 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 DEFB135Q30KP9 77 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 RNF183Q96D59 192 aa6.28□□□□□ -1.4
CDC42SE1-204ENST00000483763 TRBV7-3A0A075B6L6 115 aa6.27□□□□□ -1.41
CDC42SE1-204ENST00000483763 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
CDC42SE1-204ENST00000483763 K7EP34 96 aa6.27□□□□□ -1.41
CDC42SE1-204ENST00000483763 PLNP26678 52 aa6.27□□□□□ -1.41
CDC42SE1-204ENST00000483763 SEC61GP60059 68 aa6.27□□□□□ -1.41
CDC42SE1-204ENST00000483763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 DEFB4AO15263 64 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 PMVKQ15126 192 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 IGLV4-3A0A075B6K6 122 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 H3BRM9 83 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 K7EQD1 137 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 DEFB130BP0DP73 79 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 DEFB130AP0DP74 79 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 KRTAP10-11P60412 298 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 DNAJC30Q96LL9 226 aa6.26□□□□□ -1.41
CDC42SE1-204ENST00000483763 IGHV4-30-4P0DP06 118 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 GAGE4Q13068 117 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 FHL2Q14192 279 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
CDC42SE1-204ENST00000483763 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 LINC01549A6NIU2 74 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 LINC00694P0DN24 101 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 UBE2D3P61077 147 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 UBE2D2P62837 147 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 UBE2D4Q9Y2X8 147 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 LINC00612Q8N6U2 182 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 OR5A1Q8NGJ0 315 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 KIR2DL5BQ8NHK3 375 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
CDC42SE1-204ENST00000483763 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 MRAPQ8TCY5 172 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 TRGV4A0A0C4DH28 118 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 A0A0J9YXV3 536 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 TRBV6-4A0A1B0GX49 114 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 AMELXQ99217 191 aa6.23□□□□□ -1.41
CDC42SE1-204ENST00000483763 A6NDN8 102 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 APOC4P55056 127 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 Q6ZUT4 128 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 IGHV4-28A0A0C4DH34 117 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 E9PLD3 99 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 F5H768 121 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 J3QR89 54 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
CDC42SE1-204ENST00000483763 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 Q8NAQ8 132 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 CHAC1Q9BUX1 264 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 CELA1Q9UNI1 258 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 H3BUT2 72 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 NFE4Q86UQ8 179 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
CDC42SE1-204ENST00000483763 COL7A1Q02388 2944 aa6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 A0A0U1RRA0 63 aa6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 EGFEM1PQ0D2K5 195 aa6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 SBSPONQ8IVN8 264 aa6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 MRPS36P82909 103 aaKnown RBP6.2□□□□□ -1.42
CDC42SE1-204ENST00000483763 PAPPA-AS1Q5QFB9 102 aa6.19□□□□□ -1.42
CDC42SE1-204ENST00000483763 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
CDC42SE1-204ENST00000483763 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 RETNQ9HD89 108 aa6.18□□□□□ -1.42
CDC42SE1-204ENST00000483763 TEX48A0A1B0GUV7 120 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms