RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 APOMO95445 188 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 TSPAN13O95857 204 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
TVP23C-203ENST00000428082 TRBV20-1A0A075B6N2 111 aa11.3□□□□□ -0.6
TVP23C-203ENST00000428082 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
TVP23C-203ENST00000428082 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 UBE2D3P61077 147 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 UBE2D2P62837 147 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 WFDC2Q14508 124 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 STHQ8IWL8 128 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
TVP23C-203ENST00000428082 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 PRO0461Q9UI25 63 aa11.29□□□□□ -0.6
TVP23C-203ENST00000428082 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
TVP23C-203ENST00000428082 EGFEM1PQ0D2K5 195 aa11.28□□□□□ -0.6
TVP23C-203ENST00000428082 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
TVP23C-203ENST00000428082 CFC1BP0CG36 223 aa11.27□□□□□ -0.6
TVP23C-203ENST00000428082 CFC1P0CG37 223 aa11.27□□□□□ -0.6
TVP23C-203ENST00000428082 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.6
TVP23C-203ENST00000428082 CHCHD7Q9BUK0 85 aa11.27□□□□□ -0.6
TVP23C-203ENST00000428082 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
TVP23C-203ENST00000428082 A0A0B4J2C4 111 aa11.26□□□□□ -0.61
TVP23C-203ENST00000428082 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
TVP23C-203ENST00000428082 PSMB2P49721 201 aa11.26□□□□□ -0.61
TVP23C-203ENST00000428082 MGAM2Q2M2H8 2515 aa11.25□□□□□ -0.61
TVP23C-203ENST00000428082 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
TVP23C-203ENST00000428082 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
TVP23C-203ENST00000428082 DNHD1Q96M86 4753 aa11.25□□□□□ -0.61
TVP23C-203ENST00000428082 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
TVP23C-203ENST00000428082 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
TVP23C-203ENST00000428082 Q6ZSN1 163 aa11.24□□□□□ -0.61
TVP23C-203ENST00000428082 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
TVP23C-203ENST00000428082 A4D1N5 150 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 IL17DQ8TAD2 202 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 FAM104AQ969W3 186 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 GEMIN7Q9H840 131 aaKnown RBP11.23□□□□□ -0.61
TVP23C-203ENST00000428082 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 SCGB1C2P0DMR2 95 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 AZU1P20160 251 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 TIRAPP58753 221 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
TVP23C-203ENST00000428082 NBEAL1Q6ZS30 2694 aa11.22□□□□□ -0.61
TVP23C-203ENST00000428082 PRM2P04554 102 aa11.22□□□□□ -0.61
TVP23C-203ENST00000428082 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
TVP23C-203ENST00000428082 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
TVP23C-203ENST00000428082 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
TVP23C-203ENST00000428082 DNAH3Q8TD57 4116 aa11.22□□□□□ -0.61
TVP23C-203ENST00000428082 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
TVP23C-203ENST00000428082 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
TVP23C-203ENST00000428082 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
TVP23C-203ENST00000428082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.62
TVP23C-203ENST00000428082 IGKV2-29A2NJV5 120 aaPredicted RBP11.21□□□□□ -0.62
TVP23C-203ENST00000428082 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.62
TVP23C-203ENST00000428082 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.62
TVP23C-203ENST00000428082 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.62
TVP23C-203ENST00000428082 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.62
TVP23C-203ENST00000428082 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.62
TVP23C-203ENST00000428082 SPANXCQ9NY87 97 aa11.21□□□□□ -0.62
TVP23C-203ENST00000428082 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.62
TVP23C-203ENST00000428082 CIDEAO60543 219 aa11.2□□□□□ -0.62
TVP23C-203ENST00000428082 TIMM17BO60830 172 aa11.2□□□□□ -0.62
TVP23C-203ENST00000428082 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
TVP23C-203ENST00000428082 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 TRAV4A0A0B4J268 109 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
TVP23C-203ENST00000428082 Q6ZUT4 128 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 DAZ4Q86SG3 579 aaKnown RBP11.19□□□□□ -0.62
TVP23C-203ENST00000428082 RNF183Q96D59 192 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 DAZ3Q9NR90 486 aaKnown RBP11.19□□□□□ -0.62
TVP23C-203ENST00000428082 IGLV5-45A0A087WSX0 123 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 GAGE12HA6NDE8 117 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 TCL1BO95988 128 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
TVP23C-203ENST00000428082 K7EQD1 137 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 M0QXV9 152 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
TVP23C-203ENST00000428082 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
TVP23C-203ENST00000428082 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 SBSPONQ8IVN8 264 aa11.18□□□□□ -0.62
TVP23C-203ENST00000428082 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
TVP23C-203ENST00000428082 IGHV3OR16-12A0A075B7B8 117 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 IGHV3-38A0A0C4DH36 116 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 GIG44P09565 113 aaPredicted RBP11.17□□□□□ -0.62
TVP23C-203ENST00000428082 HERVK_113P63121 156 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 FOXI1Q12951 378 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 Q9UF83 564 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 NACAE9PAV3 2078 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 IFITM1P13164 125 aa11.17□□□□□ -0.62
TVP23C-203ENST00000428082 MIAQ16674 131 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms