RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRAPPC2BP0DI82 140 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 MGST2Q99735 147 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 REG4Q9BYZ8 158 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 CDC42SE1Q9NRR8 79 aa2.72□□□□□ -1.97
GABPB1-204ENST00000396464 DEFB106AQ8N104 65 aa2.71□□□□□ -1.98
GABPB1-204ENST00000396464 SPACA4Q8TDM5 124 aa2.71□□□□□ -1.98
GABPB1-204ENST00000396464 ORMDL1Q9P0S3 153 aa2.71□□□□□ -1.98
GABPB1-204ENST00000396464 IGKV2-28A0A075B6P5 120 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 TRBV6-8A0A0A6YYG3 113 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 TRAV12-3A0A0B4J271 114 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 CRYM-AS1A6NIL9 109 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 SIX6O95475 246 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 IGKV2D-28P01615 120 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 KRTAP13-2Q52LG2 175 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 SERP2Q8N6R1 65 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 C4orf3Q8WVX3 66 aa2.7□□□□□ -1.98
GABPB1-204ENST00000396464 HEATR1Q9H583 2144 aaKnown RBP2.69□□□□□ -1.98
GABPB1-204ENST00000396464 APOC3P02656 99 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 MPV17LQ2QL34 196 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 NDUFA11Q86Y39 141 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 PATE1Q8WXA2 126 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 MRPL36Q9P0J6 103 aaKnown RBP2.69□□□□□ -1.98
GABPB1-204ENST00000396464 CACFD1Q9UGQ2 172 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 EYSQ5T1H1 3165 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 ADAMTS9Q9P2N4 1935 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 MYOFQ9NZM1 2061 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 TRANK1O15050 2925 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 REV3LO60673 3130 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 SHROOM3Q8TF72 1996 aa2.69□□□□□ -1.98
GABPB1-204ENST00000396464 TRBV10-1A0A0K0K1A3 114 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 A0A1W2PNN7 141 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 Q5BKY6 102 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 ODF3Q96PU9 254 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 TRGV9Q99603 122 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 RABAC1Q9UI14 185 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 XIRP2A4UGR9 3374 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 CDH23Q9H251 3354 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 CHD9Q3L8U1 2897 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 TRBV7-1A0A0A6YYK4 115 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 A0A0J9YY99 117 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 IL9P15248 144 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 HMGA1P17096 107 aaKnown RBP2.68□□□□□ -1.98
GABPB1-204ENST00000396464 ADIRFQ15847 76 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 AMELYQ99218 206 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 LIMD2Q9BT23 127 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 ST20Q9HBF5 79 aa2.68□□□□□ -1.98
GABPB1-204ENST00000396464 C5orf42Q9H799 3197 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 CHD7Q9P2D1 2997 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 NUPR2A6NF83 97 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 SDHAF1A6NFY7 115 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 H3BRM9 83 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 NDUFC1O43677 76 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 DEFA5Q01523 94 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 DMAC1Q96GE9 116 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 PRO3102Q9H379 93 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
GABPB1-204ENST00000396464 MANBALQ9NQG1 85 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 SMCO4Q9NRQ5 59 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 PRO0461Q9UI25 63 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 SPCS1Q9Y6A9 102 aa2.67□□□□□ -1.98
GABPB1-204ENST00000396464 SZT2Q5T011 3432 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 GPR179Q6PRD1 2367 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 TEX49A0A1B0GTD5 131 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 SYS1-DBNDD2H3BUS1 97 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 LINC00315P59091 139 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 ETDBQ3ZM63 59 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 C10orf128Q5T292 105 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 NCBP2-AS2Q69YL0 99 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 RANBP2P49792 3224 aaKnown RBP2.66□□□□□ -1.98
GABPB1-204ENST00000396464 PRUNE2Q8WUY3 3088 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 LAMA3Q16787 3333 aa2.66□□□□□ -1.98
GABPB1-204ENST00000396464 ANKRD36A6QL64 1941 aa2.65□□□□□ -1.98
GABPB1-204ENST00000396464 SHANK1Q9Y566 2161 aa2.65□□□□□ -1.98
GABPB1-204ENST00000396464 MYO18AQ92614 2054 aaKnown RBP2.65□□□□□ -1.99
GABPB1-204ENST00000396464 IGKV3-7A0A075B6H7 116 aa2.65□□□□□ -1.99
GABPB1-204ENST00000396464 UBE2D1P51668 147 aa2.65□□□□□ -1.99
GABPB1-204ENST00000396464 ZNF818PQ6ZRF7 136 aa2.65□□□□□ -1.99
GABPB1-204ENST00000396464 PDE4DIPQ5VU43 2346 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 TRBV7-3A0A075B6L6 115 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 PDCD5O14737 125 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 WFDC2Q14508 124 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 PRR9Q5T870 116 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 LINC00299Q6ZSB3 139 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 ATRXP46100 2492 aa2.64□□□□□ -1.99
GABPB1-204ENST00000396464 MED13Q9UHV7 2174 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 BPTFQ12830 3046 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 CEP290O15078 2479 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 CEP192Q8TEP8 1941 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 IGHV3-30P01768 117 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 IGHV3-30-5P0DP03 117 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 NMSQ5H8A3 153 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 CYP2G1PQ6ZSU1 146 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 MED12LQ86YW9 2145 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 BPESC1Q9GZL8 116 aa2.63□□□□□ -1.99
GABPB1-204ENST00000396464 HIGD1BQ9P298 99 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms