RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 SAA2P0DJI9 122 aaPredicted RBP0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 COX6A2Q02221 97 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 PMCHL1Q16048 86 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 SERP2Q8N6R1 65 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 TRGV9Q99603 122 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 KMT2BQ9UMN6 2715 aaPredicted RBP0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 OTOGLQ3ZCN5 2332 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 ZGRF1Q86YA3 2104 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 SPAG17Q6Q759 2223 aa0.44□□□□□ -2.34
SNORA48.1-201ENST00000390879 PHIPQ8WWQ0 1821 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 HELZ2Q9BYK8 2649 aaKnown RBP0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 CC2D2AQ9P2K1 1620 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 LOC285556D6RIA3 1793 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 UQCRHLA0A096LP55 91 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 C7orf77A4D0Y5 90 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 H7BZZ5 65 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 UQCRHP07919 91 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 S100A3P33764 101 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 PSMG4Q5JS54 123 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 TMEM263Q8WUH6 116 aaKnown RBP0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 SMARCA2P51531 1590 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 SPHKAPQ2M3C7 1700 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 TNS1Q9HBL0 1735 aaKnown RBP0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 NWD2Q9ULI1 1742 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 ROS1P08922 2347 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 HMGXB3Q12766 1538 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 ABCA4P78363 2273 aa0.43□□□□□ -2.34
SNORA48.1-201ENST00000390879 ASCC3Q8N3C0 2202 aaKnown RBP0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 NSD3Q9BZ95 1437 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 TRBV25-1A0A075B6N4 114 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 A0A087WVE0 104 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 A0A0D9SFI3 127 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 SYS1-DBNDD2H3BUS1 97 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 GNG2P59768 71 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 C10orf113Q5VZT2 155 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 LCN9Q8WX39 176 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 SPRR4Q96PI1 79 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 V9GYS6 101 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 PRDM15P57071 1507 aaPredicted RBP0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 EHBP1L1Q8N3D4 1523 aa0.42□□□□□ -2.34
SNORA48.1-201ENST00000390879 PLEKHH2Q8IVE3 1493 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 FYCO1Q9BQS8 1478 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 MLH3Q9UHC1 1453 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 KDM5AP29375 1690 aaKnown RBP0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 MYH7P12883 1935 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 TRBV7-7A0A0K0K1E9 115 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 LINC01600Q96MT4 127 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 C20orf78Q9BR46 151 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 PRO1933Q9H354 126 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 PLAC8Q9NZF1 115 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 PRO0255Q9UI72 69 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 IFT172Q9UG01 1749 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 ADGRL2O95490 1459 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 GAPVD1Q14C86 1478 aa0.41□□□□□ -2.34
SNORA48.1-201ENST00000390879 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.34
SNORA48.1-201ENST00000390879 PRRC2BQ5JSZ5 2229 aaKnown RBP0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 FXYD6-FXYD2A0A087WZ82 144 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 TRBV6-1A0A0K0K1D8 114 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 GYPAP02724 150 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 DEFB107AQ8IZN7 70 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 HIGD1BQ9P298 99 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 SPCS1Q9Y6A9 102 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 NINQ8N4C6 2090 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 RAPGEF2Q9Y4G8 1499 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 ERCC6L2Q5T890 1561 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
SNORA48.1-201ENST00000390879 TANC1Q9C0D5 1861 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 SHROOM2Q13796 1616 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 ARMS2P0C7Q2 107 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 GNGT1P63211 74 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 ESPL1Q14674 2120 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 ETDBQ3ZM63 59 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 SPINK6Q6UWN8 80 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 ZNF720Q7Z2F6 126 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 LINC00846Q9NV44 126 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 PSENENQ9NZ42 101 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 POLA1P09884 1462 aaPredicted RBP0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 MAGI1Q96QZ7 1491 aaPredicted RBP0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 DOCK1Q14185 1865 aa0.39□□□□□ -2.35
SNORA48.1-201ENST00000390879 TOP2BQ02880 1626 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 PRDM2Q13029 1718 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 ARFGEF1Q9Y6D6 1849 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 TET3O43151 1660 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 MYOM1P52179 1685 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 ARHGEF5Q12774 1597 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 NRXN1Q9ULB1 1477 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 F8WEM9 126 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 H3BQF6 201 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 LEPROTL1O95214 131 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 C9orf62Q8N4C0 152 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 CNFNQ9BYD5 112 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 TP53AIP1Q9HCN2 124 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 PATJQ8NI35 1801 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 LRP6O75581 1613 aa0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 EDC4Q6P2E9 1401 aaKnown RBP0.38□□□□□ -2.35
SNORA48.1-201ENST00000390879 SIPA1L3O60292 1781 aaPredicted RBP0.37□□□□□ -2.35
SNORA48.1-201ENST00000390879 KIF21AQ7Z4S6 1674 aa0.37□□□□□ -2.35
SNORA48.1-201ENST00000390879 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms