RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 TLN2Q9Y4G6 2542 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 COX7A2LO14548 114 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 BRI3O95415 125 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 SOSTDC1Q6X4U4 206 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.7
COL6A2-201ENST00000300527 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 K7EMT4 169 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 H3BUA1 57 aa10.64□□□□□ -0.71
COL6A2-201ENST00000300527 CENPEQ02224 2701 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 TRBV7-7A0A0K0K1E9 115 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 TIRAPP58753 221 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 SDIM1Q6ZPB5 146 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 UBE2E2Q96LR5 201 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 FAM218AQ96MZ4 157 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 PIMREGQ9BSJ6 248 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 AVPP01185 164 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 ATP5J2P56134 94 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 HERVK_113P63121 156 aa10.63□□□□□ -0.71
COL6A2-201ENST00000300527 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
COL6A2-201ENST00000300527 NDUFA1O15239 70 aa10.62□□□□□ -0.71
COL6A2-201ENST00000300527 XCL2Q9UBD3 114 aa10.62□□□□□ -0.71
COL6A2-201ENST00000300527 LINC00643Q86TS7 51 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 TMEM126AQ9H061 195 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 IGHV4-30-2A0A087WSY4 118 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 SLURP1P55000 103 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 ZNF415Q09FC8 603 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
COL6A2-201ENST00000300527 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 DNAL4O96015 105 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 CSMD2Q7Z408 3487 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 ATP5G1P05496 136 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 C11orf68Q9H3H3 251 aaKnown RBP10.6□□□□□ -0.71
COL6A2-201ENST00000300527 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 C14orf132Q9NPU4 83 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 CELSR2Q9HCU4 2923 aa10.6□□□□□ -0.71
COL6A2-201ENST00000300527 DEFB112Q30KQ8 113 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 LINC00242Q5T6M2 205 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 hADV29S1A0JD25 119 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 ACYP1P07311 99 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 PSMB8P28062 276 aa10.59□□□□□ -0.71
COL6A2-201ENST00000300527 ZANQ9Y493 2812 aa10.58□□□□□ -0.72
COL6A2-201ENST00000300527 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
COL6A2-201ENST00000300527 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
COL6A2-201ENST00000300527 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
COL6A2-201ENST00000300527 CCL19Q99731 98 aa10.58□□□□□ -0.72
COL6A2-201ENST00000300527 FAM208BQ5VWN6 2430 aa10.58□□□□□ -0.72
COL6A2-201ENST00000300527 CRPP02741 224 aa10.58□□□□□ -0.72
COL6A2-201ENST00000300527 DEFB121Q5J5C9 76 aa10.58□□□□□ -0.72
COL6A2-201ENST00000300527 SONP18583 2426 aaKnown RBP10.58□□□□□ -0.72
COL6A2-201ENST00000300527 LINC00158P58513 81 aa10.57□□□□□ -0.72
COL6A2-201ENST00000300527 NRGNQ92686 78 aa10.57□□□□□ -0.72
COL6A2-201ENST00000300527 A0A087WVE0 104 aa10.57□□□□□ -0.72
COL6A2-201ENST00000300527 MSMBP08118 114 aa10.57□□□□□ -0.72
COL6A2-201ENST00000300527 UQCRQO14949 82 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 PFN2P35080 140 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 ACACBO00763 2458 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 TIMM17BO60830 172 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 SLPIP03973 132 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 LINC01600Q96MT4 127 aa10.56□□□□□ -0.72
COL6A2-201ENST00000300527 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
COL6A2-201ENST00000300527 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
COL6A2-201ENST00000300527 CACNA1AO00555 2505 aa10.55□□□□□ -0.72
COL6A2-201ENST00000300527 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
COL6A2-201ENST00000300527 MALP21145 153 aa10.54□□□□□ -0.72
COL6A2-201ENST00000300527 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
COL6A2-201ENST00000300527 C11orf44Q8N8P7 122 aa10.54□□□□□ -0.72
COL6A2-201ENST00000300527 A0A1B0GX51 115 aa10.54□□□□□ -0.72
COL6A2-201ENST00000300527 UBE2L6O14933 153 aa10.54□□□□□ -0.72
COL6A2-201ENST00000300527 INAFM2P0DMQ5 153 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
COL6A2-201ENST00000300527 GNLYP22749 145 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 A0A087WYN8 130 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 IMUPQ9GZP8 106 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
COL6A2-201ENST00000300527 ITPR1Q14643 2758 aa10.52□□□□□ -0.72
COL6A2-201ENST00000300527 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
COL6A2-201ENST00000300527 NCR3O14931 201 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 TRACP01848 142 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 COPS9Q8WXC6 57 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 LECT2O14960 151 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 PAX4O43316 350 aa10.52□□□□□ -0.73
COL6A2-201ENST00000300527 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
COL6A2-201ENST00000300527 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
COL6A2-201ENST00000300527 COX7CP15954 63 aa10.51□□□□□ -0.73
COL6A2-201ENST00000300527 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
COL6A2-201ENST00000300527 LINC00337Q8N6G1 96 aa10.51□□□□□ -0.73
COL6A2-201ENST00000300527 LINC00526Q96FQ7 95 aa10.51□□□□□ -0.73
COL6A2-201ENST00000300527 INSP01308 110 aa10.5□□□□□ -0.73
COL6A2-201ENST00000300527 DNAJC30Q96LL9 226 aa10.5□□□□□ -0.73
COL6A2-201ENST00000300527 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
COL6A2-201ENST00000300527 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
COL6A2-201ENST00000300527 Q6ZTI0 123 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms