RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Nr2c2apQ3TV70 140 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Psg25Q497W1 475 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm5148Q8BGG2 154 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm10190Q8BSD7 107 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Hdgfl3Q9JMG7 202 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Klk4Q9Z0M1 255 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr893K7N678 312 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Bloc1s1O55102 125 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Csn1s2bP02664 143 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Cxcl1P12850 96 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Spsb3Q571F5 354 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Patz1Q5NBY9 687 aaKnown RBP6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1381Q7TQT4 311 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1380Q7TQT5 311 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr921Q7TRC0 313 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Znf146Q8BQN6 292 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr38Q8VGP4 317 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr641Q8VGX6 312 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Mrpl3Q99N95 348 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Rab27bQ99P58 218 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Q9CX63 252 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Prr15Q9D1T5 122 aa6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ammecr1Q9JHT5 344 aaKnown RBP6.63□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ighv14-2A0A075B5R7 117 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ren2P00796 401 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 H1f0P10922 194 aaKnown RBP6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Vamp3P63024 103 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 SrstQ06666 185 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 MidnQ3TPJ7 465 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ceacam14Q78Y72 263 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm9949Q8C9F4 104 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tmem230Q8CIB6 120 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tmem129Q8K304 362 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ociad1Q9CRD0 247 aaKnown RBP6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ighv5-2A0A0A6YVX8 117 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm44501A8R0T9 150 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm15440D3Z3P4 90 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm21721J3QMK7 227 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Mcpt8P43430 247 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 CamlgP49070 294 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Rpl32P62911 135 aaKnown RBP6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Q0VG49 157 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Znf48Q3US17 591 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm5615Q3UW02 101 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Vmn1r229Q8R2A9 306 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 PigcQ9CXR4 297 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Sgms2Q9D4B1 365 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tnfrsf23Q9ER63 176 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ccl28Q9JIL2 130 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Notch1Q01705 2531 aa6.62□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ighv5-12-4A0A0A6YWG4 117 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1289A0A288CFY5 326 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Esp4A8R0T8 117 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Degs1O09005 323 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Il11P47873 199 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Supt4h1aP63271 117 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 V1rd19Q3KNP5 305 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ifna11Q61716 190 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Cox11Q6P8I6 275 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Lrtm2Q8BGX3 370 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Lypd1Q8BLC3 141 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Aadacl4Q8BM81 407 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Zfp459Q8BZ17 267 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1336Q8VGH5 314 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 DapQ91XC8 102 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Atp5sQ9CRA7 200 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Smdt1Q9DB10 107 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tbx21Q9JKD8 530 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 St6galnac5Q9QYJ1 336 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Aifm1Q9Z0X1 612 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ighv1-47A0A0A6YY41 117 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ly6g6fB2RXM6 300 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 E430018J23RikE9PZQ8 461 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Slc17a3G3UWD9 498 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm4791J3QQ14 102 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Efnb2P52800 336 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ang3P97802 145 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tgfbr1Q64729 503 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Higd1cQ76I25 96 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr193Q7TS43 309 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ankrd33Q8BXP5 385 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm9958Q8C9U4 106 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 FuomQ8R2K1 153 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr95Q8VFE2 312 aa6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Arpc1bQ9WV32 372 aaKnown RBP6.61□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ighv1-67A0A0G2JFN9 117 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Olfr1291-ps1A0A286YE47 326 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 KprpB2RUR4 657 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm15293D3YX02 93 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm10197F6QEY5 67 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Gm9767G3X930 207 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 SncaO55042 140 aaKnown RBP6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 H2-Ab1P01921 265 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 H2-DMb1P35737 261 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 NdpP48744 131 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Plp1P60202 277 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Rtl4Q3URY0 304 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Ms4a13Q5FWC3 203 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Pafah1b2Q61206 229 aa6.6□□□□□ -1.35
Trim39-205ENSMUST00000173369 Tas2r114Q7M722 309 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms