Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm25239-201ENSMUST00000174915 86 ntBASIC29.52■■■□□ 2.32
Ighv1-47A0A0A6YY41 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ighv1-47A0A0A6YY41 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ighv1-47A0A0A6YY41 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ighv1-47A0A0A6YY41 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ighv1-47A0A0A6YY41 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ighv1-47A0A0A6YY41 Psd-208ENSMUST00000224556 2034 ntBASIC26.56■■□□□ 1.84
Ighv1-47A0A0A6YY41 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ighv1-47A0A0A6YY41 Gm15042-201ENSMUST00000120212 883 ntBASIC26.24■■□□□ 1.79
Ighv1-47A0A0A6YY41 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ighv1-47A0A0A6YY41 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ighv1-47A0A0A6YY41 Gm15045-201ENSMUST00000117359 883 ntBASIC25.69■■□□□ 1.7
Ighv1-47A0A0A6YY41 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ighv1-47A0A0A6YY41 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ighv1-47A0A0A6YY41 Gm24109-201ENSMUST00000175489 103 ntBASIC25.36■■□□□ 1.65
Ighv1-47A0A0A6YY41 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ighv1-47A0A0A6YY41 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ighv1-47A0A0A6YY41 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ighv1-47A0A0A6YY41 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ighv1-47A0A0A6YY41 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.17■■□□□ 1.62
Ighv1-47A0A0A6YY41 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ighv1-47A0A0A6YY41 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ighv1-47A0A0A6YY41 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ighv1-47A0A0A6YY41 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv1-47A0A0A6YY41 Gm23366-201ENSMUST00000175022 89 ntBASIC24.75■■□□□ 1.55
Ighv1-47A0A0A6YY41 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ighv1-47A0A0A6YY41 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ighv1-47A0A0A6YY41 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-47A0A0A6YY41 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ighv1-47A0A0A6YY41 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ighv1-47A0A0A6YY41 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ighv1-47A0A0A6YY41 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Ighv1-47A0A0A6YY41 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ighv1-47A0A0A6YY41 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ighv1-47A0A0A6YY41 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ighv1-47A0A0A6YY41 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.53■■□□□ 1.52
Ighv1-47A0A0A6YY41 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ighv1-47A0A0A6YY41 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ighv1-47A0A0A6YY41 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ighv1-47A0A0A6YY41 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.27■■□□□ 1.48
Ighv1-47A0A0A6YY41 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ighv1-47A0A0A6YY41 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.18■■□□□ 1.46
Ighv1-47A0A0A6YY41 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Ighv1-47A0A0A6YY41 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.09■■□□□ 1.45
Ighv1-47A0A0A6YY41 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ighv1-47A0A0A6YY41 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.91■■□□□ 1.42
Ighv1-47A0A0A6YY41 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.9■■□□□ 1.42
Ighv1-47A0A0A6YY41 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ighv1-47A0A0A6YY41 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.86■■□□□ 1.41
Ighv1-47A0A0A6YY41 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-47A0A0A6YY41 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ighv1-47A0A0A6YY41 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv1-47A0A0A6YY41 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.79■■□□□ 1.4
Ighv1-47A0A0A6YY41 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv1-47A0A0A6YY41 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv1-47A0A0A6YY41 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ighv1-47A0A0A6YY41 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Ighv1-47A0A0A6YY41 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-47A0A0A6YY41 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-47A0A0A6YY41 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ighv1-47A0A0A6YY41 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.42■■□□□ 1.34
Ighv1-47A0A0A6YY41 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ighv1-47A0A0A6YY41 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ighv1-47A0A0A6YY41 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv1-47A0A0A6YY41 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv1-47A0A0A6YY41 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv1-47A0A0A6YY41 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-47A0A0A6YY41 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-47A0A0A6YY41 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Ighv1-47A0A0A6YY41 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ighv1-47A0A0A6YY41 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.15■■□□□ 1.3
Ighv1-47A0A0A6YY41 Gm25238-201ENSMUST00000174914 89 ntBASIC23.15■■□□□ 1.3
Ighv1-47A0A0A6YY41 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-47A0A0A6YY41 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-47A0A0A6YY41 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-47A0A0A6YY41 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.1■■□□□ 1.29
Ighv1-47A0A0A6YY41 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv1-47A0A0A6YY41 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv1-47A0A0A6YY41 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ighv1-47A0A0A6YY41 Gm27325-201ENSMUST00000175467 74 ntBASIC23.07■■□□□ 1.28
Ighv1-47A0A0A6YY41 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ighv1-47A0A0A6YY41 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Ighv1-47A0A0A6YY41 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ighv1-47A0A0A6YY41 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-47A0A0A6YY41 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.03■■□□□ 1.28
Ighv1-47A0A0A6YY41 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ighv1-47A0A0A6YY41 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ighv1-47A0A0A6YY41 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-47A0A0A6YY41 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.92■■□□□ 1.26
Ighv1-47A0A0A6YY41 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-47A0A0A6YY41 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-47A0A0A6YY41 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ighv1-47A0A0A6YY41 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ighv1-47A0A0A6YY41 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv1-47A0A0A6YY41 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
Ighv1-47A0A0A6YY41 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv1-47A0A0A6YY41 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv1-47A0A0A6YY41 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Ighv1-47A0A0A6YY41 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ighv1-47A0A0A6YY41 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms