Protein–RNA interactions for Protein: Q9D4B1

Sgms2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms2Q9D4B1 Gm25239-201ENSMUST00000174915 86 ntBASIC32.58■■■□□ 2.81
Sgms2Q9D4B1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Sgms2Q9D4B1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Sgms2Q9D4B1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.58■■■□□ 2.17
Sgms2Q9D4B1 Gm15042-201ENSMUST00000120212 883 ntBASIC27.86■■■□□ 2.05
Sgms2Q9D4B1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sgms2Q9D4B1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Sgms2Q9D4B1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sgms2Q9D4B1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sgms2Q9D4B1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.21■■□□□ 1.95
Sgms2Q9D4B1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Sgms2Q9D4B1 Gm15045-201ENSMUST00000117359 883 ntBASIC27.03■■□□□ 1.92
Sgms2Q9D4B1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.85■■□□□ 1.89
Sgms2Q9D4B1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.71■■□□□ 1.87
Sgms2Q9D4B1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sgms2Q9D4B1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sgms2Q9D4B1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.43■■□□□ 1.82
Sgms2Q9D4B1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Sgms2Q9D4B1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sgms2Q9D4B1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sgms2Q9D4B1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.12■■□□□ 1.77
Sgms2Q9D4B1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Sgms2Q9D4B1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sgms2Q9D4B1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sgms2Q9D4B1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Sgms2Q9D4B1 Gm25238-201ENSMUST00000174914 89 ntBASIC25.88■■□□□ 1.73
Sgms2Q9D4B1 Psd-208ENSMUST00000224556 2034 ntBASIC25.83■■□□□ 1.73
Sgms2Q9D4B1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sgms2Q9D4B1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
Sgms2Q9D4B1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Sgms2Q9D4B1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Sgms2Q9D4B1 Gm25262-201ENSMUST00000174934 133 ntBASIC25.26■■□□□ 1.63
Sgms2Q9D4B1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sgms2Q9D4B1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.11■■□□□ 1.61
Sgms2Q9D4B1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
Sgms2Q9D4B1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.98■■□□□ 1.59
Sgms2Q9D4B1 Gm26115-201ENSMUST00000175605 87 ntBASIC24.91■■□□□ 1.58
Sgms2Q9D4B1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.89■■□□□ 1.58
Sgms2Q9D4B1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.88■■□□□ 1.57
Sgms2Q9D4B1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sgms2Q9D4B1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.76■■□□□ 1.55
Sgms2Q9D4B1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.72■■□□□ 1.55
Sgms2Q9D4B1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sgms2Q9D4B1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sgms2Q9D4B1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sgms2Q9D4B1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sgms2Q9D4B1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Sgms2Q9D4B1 Gm8109-201ENSMUST00000194076 746 ntBASIC24.58■■□□□ 1.53
Sgms2Q9D4B1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sgms2Q9D4B1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sgms2Q9D4B1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sgms2Q9D4B1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sgms2Q9D4B1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sgms2Q9D4B1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sgms2Q9D4B1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sgms2Q9D4B1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sgms2Q9D4B1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sgms2Q9D4B1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.36■■□□□ 1.49
Sgms2Q9D4B1 Rab21-202ENSMUST00000218831 843 ntBASIC24.32■■□□□ 1.48
Sgms2Q9D4B1 Gm27325-201ENSMUST00000175467 74 ntBASIC24.28■■□□□ 1.48
Sgms2Q9D4B1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sgms2Q9D4B1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Sgms2Q9D4B1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sgms2Q9D4B1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sgms2Q9D4B1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sgms2Q9D4B1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sgms2Q9D4B1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sgms2Q9D4B1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.15■■□□□ 1.46
Sgms2Q9D4B1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.1■■□□□ 1.45
Sgms2Q9D4B1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Sgms2Q9D4B1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.02■■□□□ 1.44
Sgms2Q9D4B1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sgms2Q9D4B1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.87■■□□□ 1.41
Sgms2Q9D4B1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Sgms2Q9D4B1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.83■■□□□ 1.41
Sgms2Q9D4B1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sgms2Q9D4B1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sgms2Q9D4B1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sgms2Q9D4B1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sgms2Q9D4B1 Gm24804-201ENSMUST00000174982 85 ntBASIC23.72■■□□□ 1.39
Sgms2Q9D4B1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sgms2Q9D4B1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sgms2Q9D4B1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sgms2Q9D4B1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sgms2Q9D4B1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Sgms2Q9D4B1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sgms2Q9D4B1 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.57■■□□□ 1.36
Sgms2Q9D4B1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sgms2Q9D4B1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sgms2Q9D4B1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.48■■□□□ 1.35
Sgms2Q9D4B1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.48■■□□□ 1.35
Sgms2Q9D4B1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sgms2Q9D4B1 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.47■■□□□ 1.35
Sgms2Q9D4B1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sgms2Q9D4B1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.43■■□□□ 1.34
Sgms2Q9D4B1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sgms2Q9D4B1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sgms2Q9D4B1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sgms2Q9D4B1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.4■■□□□ 1.34
Sgms2Q9D4B1 Zfp131-205ENSMUST00000223812 663 ntBASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms