RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Higd1bQ99JY6 98 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 V1ra8Q9EQ48 279 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tmprss5Q9ER04 455 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm19410A0A140LJC7 2098 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Pcnx2Q5DU28 2122 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ep300B2RWS6 2412 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr912A0A1L1SSS5 310 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Neurog3P70661 214 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gfra1P97785 468 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Q6PIU9 354 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Habp2Q8K0D2 558 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Mrps36Q9CQX8 102 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Q9D7E4 109 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ttc32Q9DAC7 148 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Prrx1P63013 245 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 RhodP97348 210 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ms4a13Q5FWC3 203 aa10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 ChtopQ9CY57 249 aaKnown RBP10.54□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ucp1P12242 307 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Shisa6Q3UH99 525 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gpbar1Q80SS6 329 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Rgs13Q8K443 158 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Slc16a4Q8R0M8 500 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Chd8Q09XV5 2582 aaKnown RBP10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Olfr1189A2AV11 306 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tnfsf11O35235 316 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Jpt2Q6PGH2 190 aaKnown RBP10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 PigyP0C1P0 71 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 AvpP35455 168 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Arf6P62331 175 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Lhfpl1Q80SV1 220 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Gm4894Q8CA09 118 aa10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Tnrc6aQ3UHK8 1896 aaKnown RBP10.53□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv1-15A0A0A6YXA5 117 aa10.52□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Ighv9-2A0A0B4J1J4 117 aa10.52□□□□□ -0.72
Clcn3-201ENSMUST00000004430 3110082J24RikF6Z6Z2 108 aa10.52□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Rnf151Q9CQ29 239 aa10.52□□□□□ -0.72
Clcn3-201ENSMUST00000004430 G6pc2Q9Z186 355 aa10.52□□□□□ -0.72
Clcn3-201ENSMUST00000004430 Adamts20P59511 1906 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm12169F2Z474 250 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 SrstQ06666 185 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Znf329Q6GQR8 522 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Q9CX63 252 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 PdfS4R2K0 231 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav6n-5A0A075B621 112 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav6-5A0A075B6B5 112 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Rpl13aP19253 203 aaKnown RBP10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Vmn1r202Q8R259 302 aa10.52□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Scgb1b11A0A087WQJ0 93 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trbv13-3A0A0B4J1H2 113 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Inafm1E9PV59 130 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm20458E9PXJ7 78 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 TymsP07607 307 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Try10Q792Z1 246 aaKnown RBP10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ssbp1Q9CYR0 152 aaKnown RBP10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Cml3Q9JIY8 226 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Scgb1b19F6WYW0 93 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ascl2O35885 263 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ccl11P48298 97 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 9930022D16RikQ8BG27 128 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav5-1A0A075B5Z7 114 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Q3U1D9 316 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav6-2Q5R1I4 113 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Q9CQM1 111 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Tspo2Q9CRZ8 162 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Plxnb1Q8CJH3 2119 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Dkk1O54908 272 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Lcn2P11672 200 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 SelenotP62342 195 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 G430049J08RikQ3TL09 166 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 RprmlQ3URD2 117 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Olfr1419Q7TQS2 343 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Cox19Q8K0C8 92 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 VsirQ9D659 308 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Hs3st3b1Q9QZS6 390 aa10.51□□□□□ -0.73
Clcn3-201ENSMUST00000004430 BC053393A0A0B4J1F6 192 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav3n-3A0A0G2JEM0 114 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa3P28310 93 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa10P50708 93 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa15P50713 93 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Plp1P60202 277 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Zfp420Q7TMN8 578 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Nanos1Q80WY3 267 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ufc1Q9CR09 167 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Notch4P31695 1964 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm17430F6RSK3 157 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa37K9J724 93 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa5P28312 93 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Cdkn1bP46414 197 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 OstcQ78XF5 149 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 RtbdnQ8QZY4 247 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ssbp2Q9CYZ8 361 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Sdk1Q3UH53 2193 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trbv19A0A0B4J1H4 117 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Wfdc11A2A5H7 82 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 H3BKT1 185 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Zfp92Q62396 488 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 SergefQ80YD6 464 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Srsf7Q8BL97 267 aaKnown RBP10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Vmn1r70Q8R254 298 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms