RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B GAL4P04386 881 aa1.06□□□□□ -2.24
snR39BsnR39B PCK1P10963 549 aa1.06□□□□□ -2.24
snR39BsnR39B IMG2P25642 146 aaPredicted RBP1.06□□□□□ -2.24
snR39BsnR39B GSH1P32477 678 aa1.06□□□□□ -2.24
snR39BsnR39B PCL6P40038 420 aa1.06□□□□□ -2.24
snR39BsnR39B CIN1P40987 1014 aa1.06□□□□□ -2.24
snR39BsnR39B NOP2P40991 618 aaKnown RBP1.06□□□□□ -2.24
snR39BsnR39B YNL144CP53907 740 aa1.06□□□□□ -2.24
snR39BsnR39B SND1Q04007 877 aa1.06□□□□□ -2.24
snR39BsnR39B YLR352WQ06479 807 aa1.06□□□□□ -2.24
snR39BsnR39B MRN1Q08925 612 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
snR39BsnR39B AIM41Q12032 185 aa1.06□□□□□ -2.24
snR39BsnR39B TUF1P02992 437 aaKnown RBP1.05□□□□□ -2.24
snR39BsnR39B YML002WP0CF17 737 aa1.05□□□□□ -2.24
snR39BsnR39B MAK32P23060 363 aa1.05□□□□□ -2.24
snR39BsnR39B CNA1P23287 553 aa1.05□□□□□ -2.24
snR39BsnR39B NIC96P34077 839 aa1.05□□□□□ -2.24
snR39BsnR39B CDS1P38221 457 aa1.05□□□□□ -2.24
snR39BsnR39B YND1P40009 630 aa1.05□□□□□ -2.24
snR39BsnR39B LAS21P40367 830 aa1.05□□□□□ -2.24
snR39BsnR39B BUD8P41698 603 aa1.05□□□□□ -2.24
snR39BsnR39B APJ1P53940 528 aa1.05□□□□□ -2.24
snR39BsnR39B TIM50Q02776 476 aa1.05□□□□□ -2.24
snR39BsnR39B ECM22Q05958 814 aaPredicted RBP1.05□□□□□ -2.24
snR39BsnR39B RRI1Q12468 440 aa1.05□□□□□ -2.24
snR39BsnR39B CBS2P14905 389 aa1.04□□□□□ -2.24
snR39BsnR39B CDC23P16522 626 aa1.04□□□□□ -2.24
snR39BsnR39B SEC18P18759 758 aaKnown RBP1.04□□□□□ -2.24
snR39BsnR39B MEF1P25039 761 aa1.04□□□□□ -2.24
snR39BsnR39B LDB16P25587 256 aa1.04□□□□□ -2.24
snR39BsnR39B PRE4P30657 266 aa1.04□□□□□ -2.24
snR39BsnR39B PRO3P32263 286 aaKnown RBP1.04□□□□□ -2.24
snR39BsnR39B YKU70P32807 602 aa1.04□□□□□ -2.24
snR39BsnR39B IMD2P38697 523 aaKnown RBP1.04□□□□□ -2.24
snR39BsnR39B CRG1P38892 291 aaRIP-Chip data1.04□□□□□ -2.24not detected
snR39BsnR39B YEL068CP39977 110 aa1.04□□□□□ -2.24
snR39BsnR39B FTR1P40088 404 aa1.04□□□□□ -2.24
snR39BsnR39B YJR061WP40355 935 aa1.04□□□□□ -2.24
snR39BsnR39B YJL070CP40361 888 aa1.04□□□□□ -2.24
snR39BsnR39B IMD3P50095 523 aaKnown RBP1.04□□□□□ -2.24
snR39BsnR39B HUL5P53119 910 aa1.04□□□□□ -2.24
snR39BsnR39B CUL3P53202 744 aa1.04□□□□□ -2.24
snR39BsnR39B DIG1Q03063 452 aaKnown RBP1.04□□□□□ -2.24
snR39BsnR39B NSE5Q03718 556 aa1.04□□□□□ -2.24
snR39BsnR39B YPS7Q06325 596 aa1.04□□□□□ -2.24
snR39BsnR39B YOR389WQ08912 624 aa1.04□□□□□ -2.24
snR39BsnR39B YOR131CQ12486 218 aa1.04□□□□□ -2.24
snR39BsnR39B MDM12Q92328 271 aa1.04□□□□□ -2.24
snR39BsnR39B HMG1P12683 1054 aa1.03□□□□□ -2.24
snR39BsnR39B PMS1P14242 873 aa1.03□□□□□ -2.24
snR39BsnR39B SWH1P35845 1188 aa1.03□□□□□ -2.24
snR39BsnR39B LRO1P40345 661 aa1.03□□□□□ -2.24
snR39BsnR39B QRI7P43122 407 aa1.03□□□□□ -2.24
snR39BsnR39B TAF4P50105 388 aa1.03□□□□□ -2.24
snR39BsnR39B ORC5P50874 479 aa1.03□□□□□ -2.24
snR39BsnR39B ECM16Q04217 1267 aaKnown RBP1.03□□□□□ -2.24
snR39BsnR39B YLR407WQ06070 228 aa1.03□□□□□ -2.24
snR39BsnR39B ATG33Q06485 197 aa1.03□□□□□ -2.24
snR39BsnR39B ERR1P0CX10 437 aa1.02□□□□□ -2.25
snR39BsnR39B ERR2P0CX11 437 aa1.02□□□□□ -2.25
snR39BsnR39B YPK1P12688 680 aaKnown RBP1.02□□□□□ -2.25
snR39BsnR39B BET2P20133 325 aa1.02□□□□□ -2.25
snR39BsnR39B HES1P35843 434 aa1.02□□□□□ -2.25
snR39BsnR39B YJL193WP39542 402 aa1.02□□□□□ -2.25
snR39BsnR39B CHZ1P40019 153 aaPredicted RBP1.02□□□□□ -2.25
snR39BsnR39B YJL107CP42947 387 aa1.02□□□□□ -2.25
snR39BsnR39B VPS25P47142 202 aa1.02□□□□□ -2.25
snR39BsnR39B YGL242CP53066 181 aa1.02□□□□□ -2.25
snR39BsnR39B AIM14P53109 570 aa1.02□□□□□ -2.25
snR39BsnR39B COG2P53271 262 aa1.02□□□□□ -2.25
snR39BsnR39B YNL092WP53934 400 aa1.02□□□□□ -2.25
snR39BsnR39B ORC1P54784 914 aaPredicted RBP1.02□□□□□ -2.25
snR39BsnR39B RAD33Q04231 177 aa1.02□□□□□ -2.25
snR39BsnR39B ECI1Q05871 280 aa1.02□□□□□ -2.25
snR39BsnR39B ARR3Q06598 404 aa1.02□□□□□ -2.25
snR39BsnR39B TLG2Q08144 397 aa1.02□□□□□ -2.25
snR39BsnR39B LYS21Q12122 440 aaKnown RBP1.02□□□□□ -2.25
snR39BsnR39B GIN4Q12263 1142 aa1.02□□□□□ -2.25
snR39BsnR39B YBR298C-AQ8TGK4 73 aa1.02□□□□□ -2.25
snR39BsnR39B VPS33P20795 691 aa1.01□□□□□ -2.25
snR39BsnR39B BUD14P27637 709 aa1.01□□□□□ -2.25
snR39BsnR39B MTC7P32633 139 aa1.01□□□□□ -2.25
snR39BsnR39B KES1P35844 434 aaKnown RBP1.01□□□□□ -2.25
snR39BsnR39B ARN1P38731 627 aa1.01□□□□□ -2.25
snR39BsnR39B DSS1P39112 969 aa1.01□□□□□ -2.25
snR39BsnR39B PRM2P40534 656 aa1.01□□□□□ -2.25
snR39BsnR39B PFA4Q12006 378 aa1.01□□□□□ -2.25
snR39BsnR39B PPT2Q12036 173 aa1.01□□□□□ -2.25
snR39BsnR39B Q0010Q9ZZX9 128 aa1.01□□□□□ -2.25
snR39BsnR39B SEC12P11655 471 aa1□□□□□ -2.25
snR39BsnR39B GLN4P13188 809 aaKnown RBP1□□□□□ -2.25
snR39BsnR39B CBP3P21560 335 aa1□□□□□ -2.25
snR39BsnR39B PCL2P25693 308 aa1□□□□□ -2.25
snR39BsnR39B MSS51P32335 436 aa1□□□□□ -2.25
snR39BsnR39B PLC1P32383 869 aa1□□□□□ -2.25
snR39BsnR39B CDC5P32562 705 aa1□□□□□ -2.25
snR39BsnR39B AVT5P38176 459 aa1□□□□□ -2.25
snR39BsnR39B PCM1P38628 557 aaKnown RBP1□□□□□ -2.25
snR39BsnR39B MAM1P40065 302 aa1□□□□□ -2.25
snR39BsnR39B YDL183CP48569 320 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms