RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C STB5P38699 743 aa8.58□□□□□ -1.04
SRP54YPR088C BTT1P40314 149 aaPredicted RBP8.58□□□□□ -1.04
SRP54YPR088C YJL132WP47014 750 aa8.58□□□□□ -1.04
SRP54YPR088C YPR003CP53394 754 aa8.58□□□□□ -1.04
SRP54YPR088C HIS1P00498 297 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C KAR4P25583 335 aa8.57□□□□□ -1.04
SRP54YPR088C URA7P28274 579 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C ECM13P38195 257 aa8.57□□□□□ -1.04
SRP54YPR088C OTU2P38747 307 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C EDC3P39998 551 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C ALA1P40825 983 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C MAF1P41910 395 aa8.57□□□□□ -1.04
SRP54YPR088C RTT101P47050 842 aa8.57□□□□□ -1.04
SRP54YPR088C MRX6P48564 524 aa8.57□□□□□ -1.04
SRP54YPR088C ZIP2P53061 704 aa8.57□□□□□ -1.04
SRP54YPR088C EAR1Q03212 550 aa8.57□□□□□ -1.04
SRP54YPR088C AAD15Q08361 143 aa8.57□□□□□ -1.04
SRP54YPR088C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
SRP54YPR088C SPE3Q12074 293 aaKnown RBP8.57□□□□□ -1.04
SRP54YPR088C NDJ1Q12366 352 aa8.57□□□□□ -1.04
SRP54YPR088C AHC1Q12433 566 aa8.57□□□□□ -1.04
SRP54YPR088C RPB2P08518 1224 aaKnown RBP8.56□□□□□ -1.04
SRP54YPR088C ILS1P09436 1072 aaKnown RBP8.56□□□□□ -1.04
SRP54YPR088C PDE1P22434 369 aa8.56□□□□□ -1.04
SRP54YPR088C TSR4P25040 408 aa8.56□□□□□ -1.04
SRP54YPR088C ADY2P25613 283 aa8.56□□□□□ -1.04
SRP54YPR088C URK1P27515 501 aa8.56□□□□□ -1.04
SRP54YPR088C RAD16P31244 790 aa8.56□□□□□ -1.04
SRP54YPR088C FUI1P38196 639 aa8.56□□□□□ -1.04
SRP54YPR088C PPE1P38796 400 aa8.56□□□□□ -1.04
SRP54YPR088C YEL028WP39989 153 aa8.56□□□□□ -1.04
SRP54YPR088C IML2P47031 731 aa8.56□□□□□ -1.04
SRP54YPR088C TAH11P47112 604 aa8.56□□□□□ -1.04
SRP54YPR088C YLR257WQ06146 321 aaKnown RBP8.56□□□□□ -1.04
SRP54YPR088C MPC54Q08550 464 aa8.56□□□□□ -1.04
SRP54YPR088C ILV2P07342 687 aaKnown RBP8.55□□□□□ -1.04
SRP54YPR088C SPE1P08432 466 aa8.55□□□□□ -1.04
SRP54YPR088C AIM26P32858 118 aa8.55□□□□□ -1.04
SRP54YPR088C NUP60P39705 539 aa8.55□□□□□ -1.04
SRP54YPR088C CNN1P43618 361 aa8.55□□□□□ -1.04
SRP54YPR088C UTP8P53276 713 aaKnown RBP8.55□□□□□ -1.04
SRP54YPR088C PIG1Q06216 648 aa8.55□□□□□ -1.04
SRP54YPR088C ENO2P00925 437 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C CDC20P26309 610 aa8.54□□□□□ -1.04
SRP54YPR088C PTC3P34221 468 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C KES1P35844 434 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C YBP1P38315 674 aa8.54□□□□□ -1.04
SRP54YPR088C YAT2P40017 923 aa8.54□□□□□ -1.04
SRP54YPR088C ATM1P40416 690 aa8.54□□□□□ -1.04
SRP54YPR088C EMW1P42842 904 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C RPS10BP46784 105 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C SNG1P46950 547 aa8.54□□□□□ -1.04
SRP54YPR088C KTR5P53966 522 aaPredicted RBP8.54□□□□□ -1.04
SRP54YPR088C INP2Q03824 705 aa8.54□□□□□ -1.04
SRP54YPR088C ADE13Q05911 482 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C RPS10AQ08745 105 aaPredicted RBP8.54□□□□□ -1.04
SRP54YPR088C ERR1P0CX10 437 aa8.54□□□□□ -1.04
SRP54YPR088C ERR2P0CX11 437 aa8.54□□□□□ -1.04
SRP54YPR088C MTF1P14908 341 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C YCR051WP25631 222 aa8.54□□□□□ -1.04
SRP54YPR088C UTR2P32623 467 aa8.54□□□□□ -1.04
SRP54YPR088C SMF2P38778 549 aa8.54□□□□□ -1.04
SRP54YPR088C SFB3P38810 929 aa8.54□□□□□ -1.04
SRP54YPR088C SPC97P38863 823 aa8.54□□□□□ -1.04
SRP54YPR088C VPS41P38959 992 aa8.54□□□□□ -1.04
SRP54YPR088C ERR3P42222 437 aa8.54□□□□□ -1.04
SRP54YPR088C PSP1P50896 841 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C YNL034WP53963 612 aa8.54□□□□□ -1.04
SRP54YPR088C YNL018CP53976 612 aa8.54□□□□□ -1.04
SRP54YPR088C PIR3Q03180 325 aa8.54□□□□□ -1.04
SRP54YPR088C CUE5Q08412 411 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C HOS1Q12214 470 aa8.54□□□□□ -1.04
SRP54YPR088C LPX1Q12405 387 aaKnown RBP8.54□□□□□ -1.04
SRP54YPR088C PEX1P24004 1043 aa8.53□□□□□ -1.04
SRP54YPR088C PMI40P29952 429 aaKnown RBP8.53□□□□□ -1.04
SRP54YPR088C SEC6P32844 805 aa8.53□□□□□ -1.04
SRP54YPR088C URA8P38627 578 aaPredicted RBP8.53□□□□□ -1.04
SRP54YPR088C NRD1P53617 575 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
SRP54YPR088C ENT5Q03769 411 aaKnown RBP8.53□□□□□ -1.04
SRP54YPR088C YMR160WQ03823 816 aa8.53□□□□□ -1.04
SRP54YPR088C ARP9Q05123 467 aa8.53□□□□□ -1.04
SRP54YPR088C ECM38Q05902 660 aaPredicted RBP8.53□□□□□ -1.04
SRP54YPR088C BSP1Q06604 576 aa8.53□□□□□ -1.04
SRP54YPR088C YPQ1Q12010 308 aa8.53□□□□□ -1.04
SRP54YPR088C NCA2Q12374 616 aa8.53□□□□□ -1.04
SRP54YPR088C TEF1P02994 458 aaKnown RBP8.52□□□□□ -1.05
SRP54YPR088C PAT1P25644 796 aaKnown RBP8.52□□□□□ -1.05
SRP54YPR088C SYN8P31377 255 aa8.52□□□□□ -1.05
SRP54YPR088C SET3P36124 751 aa8.52□□□□□ -1.05
SRP54YPR088C KAP104P38217 918 aaKnown RBP8.52□□□□□ -1.05
SRP54YPR088C SAF1P38352 637 aa8.52□□□□□ -1.05
SRP54YPR088C VAC8P39968 578 aa8.52□□□□□ -1.05
SRP54YPR088C UFE1P41834 346 aa8.52□□□□□ -1.05
SRP54YPR088C TRS85P46944 698 aa8.52□□□□□ -1.05
SRP54YPR088C SWC7Q06707 132 aa8.52□□□□□ -1.05
SRP54YPR088C MIS1P09440 975 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C HMG2P12684 1045 aa8.51□□□□□ -1.05
SRP54YPR088C SRV2P17555 526 aaKnown RBP8.51□□□□□ -1.05
SRP54YPR088C GID7P25569 745 aa8.51□□□□□ -1.05
SRP54YPR088C KIP2P28743 706 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms