RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W COS6P53344 381 aa5.66□□□□□ -1.5
PDH1YPR002W PTA1Q01329 785 aaPredicted RBP5.66□□□□□ -1.5
PDH1YPR002W HMO1Q03973 246 aaKnown RBP5.66□□□□□ -1.5
PDH1YPR002W PRM6Q04705 352 aa5.66□□□□□ -1.5
PDH1YPR002W IVY1Q04934 453 aa5.66□□□□□ -1.5
PDH1YPR002W GUD1Q07729 489 aa5.66□□□□□ -1.5
PDH1YPR002W VHS3Q08438 674 aa5.66□□□□□ -1.5
PDH1YPR002W YLR053CQ12026 108 aa5.66□□□□□ -1.5
PDH1YPR002W SLP1Q12232 587 aa5.66□□□□□ -1.5
PDH1YPR002W GPM3Q12326 303 aa5.66□□□□□ -1.5
PDH1YPR002W GIS3Q12418 502 aa5.66□□□□□ -1.5
PDH1YPR002W UBR2Q07963 1872 aa5.65□□□□□ -1.5
PDH1YPR002W SSC1P0CS90 654 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W CDC24P11433 854 aaPredicted RBP5.65□□□□□ -1.5
PDH1YPR002W ADE2P21264 571 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W SIP2P34164 415 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W YKL222CP35995 705 aa5.65□□□□□ -1.5
PDH1YPR002W ETR1P38071 380 aa5.65□□□□□ -1.5
PDH1YPR002W TDA11P38854 504 aa5.65□□□□□ -1.5
PDH1YPR002W TMA108P40462 946 aa5.65□□□□□ -1.5
PDH1YPR002W AVT1P47082 602 aa5.65□□□□□ -1.5
PDH1YPR002W BIO4P53630 237 aa5.65□□□□□ -1.5
PDH1YPR002W KTR5P53966 522 aaPredicted RBP5.65□□□□□ -1.5
PDH1YPR002W ROD1Q02805 837 aa5.65□□□□□ -1.5
PDH1YPR002W INP2Q03824 705 aa5.65□□□□□ -1.5
PDH1YPR002W TY1A-DR2Q03964 440 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W BUD22Q04347 519 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W HPF1Q05164 967 aa5.65□□□□□ -1.5
PDH1YPR002W SNX3Q08826 162 aaKnown RBP5.65□□□□□ -1.5
PDH1YPR002W SPE4Q12455 300 aa5.65□□□□□ -1.5
PDH1YPR002W AVL9Q12500 764 aa5.65□□□□□ -1.5
PDH1YPR002W RAD18P10862 487 aa5.64□□□□□ -1.51
PDH1YPR002W YAK1P14680 807 aa5.64□□□□□ -1.51
PDH1YPR002W ICL1P28240 557 aaPredicted RBP5.64□□□□□ -1.51
PDH1YPR002W YSC84P32793 468 aa5.64□□□□□ -1.51
PDH1YPR002W COT1P32798 439 aa5.64□□□□□ -1.51
PDH1YPR002W SEG2P34250 1132 aa5.64□□□□□ -1.51
PDH1YPR002W FMP33P46998 180 aa5.64□□□□□ -1.51
PDH1YPR002W ZAP1P47043 880 aa5.64□□□□□ -1.51
PDH1YPR002W INP52P50942 1183 aa5.64□□□□□ -1.51
PDH1YPR002W DRN1P53255 507 aaKnown RBP5.64□□□□□ -1.51
PDH1YPR002W IST1P53843 298 aaPredicted RBP5.64□□□□□ -1.51
PDH1YPR002W KIN4Q01919 800 aa5.64□□□□□ -1.51
PDH1YPR002W RPM2Q02773 1202 aa5.64□□□□□ -1.51
PDH1YPR002W ACL4Q03771 387 aa5.64□□□□□ -1.51
PDH1YPR002W MSH6Q03834 1242 aa5.64□□□□□ -1.51
PDH1YPR002W ADE13Q05911 482 aaKnown RBP5.64□□□□□ -1.51
PDH1YPR002W KAP95Q06142 861 aaKnown RBP5.64□□□□□ -1.51
PDH1YPR002W YCS4Q06156 1176 aa5.64□□□□□ -1.51
PDH1YPR002W IWR1Q07532 353 aaPredicted RBP5.64□□□□□ -1.51
PDH1YPR002W CRD1Q07560 283 aa5.64□□□□□ -1.51
PDH1YPR002W GET4Q12125 312 aa5.64□□□□□ -1.51
PDH1YPR002W TAF3Q12297 353 aa5.64□□□□□ -1.51
PDH1YPR002W NKP1Q12493 238 aa5.64□□□□□ -1.51
PDH1YPR002W ECM3Q99252 613 aa5.64□□□□□ -1.51
PDH1YPR002W TYR1P20049 452 aa5.63□□□□□ -1.51
PDH1YPR002W URA4P20051 364 aa5.63□□□□□ -1.51
PDH1YPR002W NPP1P25353 742 aa5.63□□□□□ -1.51
PDH1YPR002W AAD3P25612 363 aa5.63□□□□□ -1.51
PDH1YPR002W CDC20P26309 610 aa5.63□□□□□ -1.51
PDH1YPR002W RPC19P28000 142 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W PUP2P32379 260 aa5.63□□□□□ -1.51
PDH1YPR002W CBF2P32504 956 aa5.63□□□□□ -1.51
PDH1YPR002W SEC6P32844 805 aa5.63□□□□□ -1.51
PDH1YPR002W SLA2P33338 968 aa5.63□□□□□ -1.51
PDH1YPR002W PIN4P34217 668 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PDH1YPR002W NUP120P35729 1037 aa5.63□□□□□ -1.51
PDH1YPR002W HES1P35843 434 aa5.63□□□□□ -1.51
PDH1YPR002W ECM4P36156 370 aa5.63□□□□□ -1.51
PDH1YPR002W STV1P37296 890 aa5.63□□□□□ -1.51
PDH1YPR002W DPH1P40487 425 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W SAD1P43589 448 aa5.63□□□□□ -1.51
PDH1YPR002W ALY2P47029 1046 aa5.63□□□□□ -1.51
PDH1YPR002W HLJ1P48353 224 aa5.63□□□□□ -1.51
PDH1YPR002W HSH155P49955 971 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W YGR035CP53222 116 aa5.63□□□□□ -1.51
PDH1YPR002W YGR125WP53273 1036 aa5.63□□□□□ -1.51
PDH1YPR002W ADI1Q03677 179 aa5.63□□□□□ -1.51
PDH1YPR002W SPH1Q06160 661 aa5.63□□□□□ -1.51
PDH1YPR002W YET3Q07451 203 aa5.63□□□□□ -1.51
PDH1YPR002W TEF1P02994 458 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W IMA3P0CW40 589 aa5.63□□□□□ -1.51
PDH1YPR002W IMA4P0CW41 589 aa5.63□□□□□ -1.51
PDH1YPR002W FUS1P11710 512 aa5.63□□□□□ -1.51
PDH1YPR002W URA7P28274 579 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W GCN20P43535 752 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W ASN1P49089 572 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W RNR4P49723 345 aaKnown RBP5.63□□□□□ -1.51
PDH1YPR002W TEP1P53916 434 aa5.63□□□□□ -1.51
PDH1YPR002W DAL4Q04895 635 aa5.63□□□□□ -1.51
PDH1YPR002W THI7Q05998 598 aa5.63□□□□□ -1.51
PDH1YPR002W IMA2Q08295 589 aa5.63□□□□□ -1.51
PDH1YPR002W COX11P19516 300 aaKnown RBP5.62□□□□□ -1.51
PDH1YPR002W TRX1P22217 103 aaKnown RBP5.62□□□□□ -1.51
PDH1YPR002W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
PDH1YPR002W RAD14P28519 371 aa5.62□□□□□ -1.51
PDH1YPR002W VPH2P32341 215 aa5.62□□□□□ -1.51
PDH1YPR002W CUE2P36075 443 aaKnown RBP5.62□□□□□ -1.51
PDH1YPR002W CHS6P40955 746 aa5.62□□□□□ -1.51
PDH1YPR002W SEC27P41811 889 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms