RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	VIP1	Q06685	1146 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	YDL121C	Q07541	149 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	ADY3	Q07732	790 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
LCL1	YPL056C	VHS3	Q08438	674 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	PUS7	Q08647	676 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	RCN2	Q12044	265 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	VPS54	Q12071	889 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	SPE3	Q12074	293 aa	Known RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	DAS2	Q12084	232 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	HUA2	Q12134	243 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RUP1	Q12242	671 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	TRM11	Q12463	433 aa		2.72	□□□□□ -1.97
LCL1	YPL056C	RRP36	Q12481	300 aa	Predicted RBP	2.72	□□□□□ -1.97
LCL1	YPL056C	HKR1	P41809	1802 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RPS17A	P02407	136 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	URA3	P03962	267 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	THS1	P04801	734 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	RPS9B	P05755	195 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	ATR1	P13090	542 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RPS17B	P14127	136 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	POL3	P15436	1097 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
LCL1	YPL056C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
LCL1	YPL056C	MRPL33	P20084	86 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	DIT1	P21623	536 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ATP12	P22135	325 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	PTP1	P25044	335 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RVS161	P25343	265 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	POL4	P25615	582 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	CWH43	P25618	953 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	COQ8	P27697	501 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	VMA6	P32366	345 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	YET1	P35723	206 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	STB6	P36085	766 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	NTR2	P36118	322 aa	Predicted RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	UTP30	P36144	274 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	NAT2	P37293	288 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	YBR032W	P38223	100 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ALG14	P38242	237 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	BSD2	P38356	321 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	TIF5	P38431	405 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	RIM11	P38615	370 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
LCL1	YPL056C	OCA5	P38738	679 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	CTM1	P38818	585 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
LCL1	YPL056C	MSS4	P38994	779 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	VMA7	P39111	118 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	VFA1	P40080	203 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	FMP10	P40098	244 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	YTA12	P40341	825 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	AGE2	P40529	298 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	TED1	P40533	473 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	EMW1	P42842	904 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	CNN1	P43618	361 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	NUP85	P46673	744 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	BPL1	P48445	690 aa	Predicted RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	DSD1	P53095	428 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	MET13	P53128	600 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	YGL108C	P53139	140 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	YGR067C	P53243	804 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	DRN1	P53255	507 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	UTP8	P53276	713 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	MRPS35	P53292	345 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	DUS1	P53759	423 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	YNL115C	P53925	644 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	EGD1	Q02642	157 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	ECM23	Q02710	187 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ERO1	Q03103	563 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RMT2	Q03305	412 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	CWC21	Q03375	135 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	ARX1	Q03862	593 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	HED1	Q03937	162 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RAD30	Q04049	632 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	URC2	Q04411	772 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	SOV1	Q04748	898 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ADE13	Q05911	482 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	CRN1	Q06440	651 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ATG20	Q07528	640 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	BRE4	Q07660	1125 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	FRA1	Q07825	749 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	YLR001C	Q07895	862 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	PEX15	Q08215	383 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	AFT2	Q08957	416 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	TMA46	Q12000	345 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	MET32	Q12041	191 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	THP3	Q12049	470 aa	Known RBP	2.71	□□□□□ -1.98
LCL1	YPL056C	YPR022C	Q12139	1133 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	RTR2	Q12378	196 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	SET6	Q12529	373 aa		2.71	□□□□□ -1.98
LCL1	YPL056C	ADR1	P07248	1323 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	YGL041W-A	P0C5N3	154 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	MRP13	P12686	339 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	CLN3	P13365	580 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	GLK1	P17709	500 aa	Known RBP	2.7	□□□□□ -1.98
LCL1	YPL056C	CKA2	P19454	339 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	PRP9	P19736	530 aa	Known RBP	2.7	□□□□□ -1.98
LCL1	YPL056C	SFL1	P20134	766 aa		2.7	□□□□□ -1.98
LCL1	YPL056C	DBP5	P20449	482 aa	Known RBP	2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms