RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	MAK32	P23060	363 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	SEC65	P29478	273 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	YHR033W	P38690	423 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	TES1	P41903	349 aa	Known RBP	3.28	□□□□□ -1.88
RUD3	YOR216C	YGL260W	P53056	76 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	YNL193W	P53870	558 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	ARC40	P38328	384 aa	Known RBP	3.28	□□□□□ -1.88
RUD3	YOR216C	YJL193W	P39542	402 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	YNL092W	P53934	400 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	TFB2	Q02939	513 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	SNU56	Q03782	492 aa	Known RBP	3.28	□□□□□ -1.88
RUD3	YOR216C	RAD33	Q04231	177 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	RTT103	Q05543	409 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	ATX2	Q12067	313 aa		3.28	□□□□□ -1.88
RUD3	YOR216C	HMG2	P12684	1045 aa		3.27	□□□□□ -1.89
RUD3	YOR216C	VPS33	P20795	691 aa		3.27	□□□□□ -1.89
RUD3	YOR216C	HXT6	P39003	570 aa	Known RBP	3.27	□□□□□ -1.89
RUD3	YOR216C	HXT7	P39004	570 aa		3.27	□□□□□ -1.89
RUD3	YOR216C	FTH1	P38310	465 aa		3.26	□□□□□ -1.89
RUD3	YOR216C	TOM71	P38825	639 aa	Known RBP	3.26	□□□□□ -1.89
RUD3	YOR216C	CIN1	P40987	1014 aa		3.26	□□□□□ -1.89
RUD3	YOR216C	VTC3	Q02725	835 aa		3.26	□□□□□ -1.89
RUD3	YOR216C	POB3	Q04636	552 aa	Known RBP	3.26	□□□□□ -1.89
RUD3	YOR216C	DSE3	Q08729	430 aa		3.26	□□□□□ -1.89
RUD3	YOR216C	CDC26	P14724	124 aa		3.25	□□□□□ -1.89
RUD3	YOR216C	GDA1	P32621	518 aa		3.25	□□□□□ -1.89
RUD3	YOR216C	CKB2	P38930	258 aa		3.25	□□□□□ -1.89
RUD3	YOR216C	MF(ALPHA)2	P32435	120 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	CDC5	P32562	705 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	FAT1	P38225	669 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	VID28	P40547	921 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	SKP2	P42843	763 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	YJR096W	P47137	282 aa		3.24	□□□□□ -1.89
RUD3	YOR216C	YMR034C	Q05131	434 aa	Predicted RBP	3.24	□□□□□ -1.89
RUD3	YOR216C	DSS4	P32601	143 aa		3.23	□□□□□ -1.89
RUD3	YOR216C	RMA1	P36001	430 aa	Known RBP	3.23	□□□□□ -1.89
RUD3	YOR216C	OAF3	P36023	863 aa		3.23	□□□□□ -1.89
RUD3	YOR216C	YMR317W	Q04893	1140 aa		3.23	□□□□□ -1.89
RUD3	YOR216C	MLH2	Q07980	695 aa		3.23	□□□□□ -1.89
RUD3	YOR216C	CRT10	Q08226	957 aa		3.23	□□□□□ -1.89
RUD3	YOR216C	YGR153W	P48238	217 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	ECM9	Q02202	377 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	TUF1	P02992	437 aa	Known RBP	3.22	□□□□□ -1.89
RUD3	YOR216C	ILS1	P09436	1072 aa	Known RBP	3.22	□□□□□ -1.89
RUD3	YOR216C	BET2	P20133	325 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	YNL058C	P53947	316 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	PFA4	Q12006	378 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	HFI1	Q12060	488 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	YMR230W-A	Q3E7B5	62 aa		3.22	□□□□□ -1.89
RUD3	YOR216C	PCK1	P10963	549 aa		3.21	□□□□□ -1.9
RUD3	YOR216C	FMP46	P36141	133 aa	Known RBP	3.21	□□□□□ -1.9
RUD3	YOR216C	SCO2	P38072	301 aa		3.21	□□□□□ -1.9
RUD3	YOR216C	OCA5	P38738	679 aa		3.21	□□□□□ -1.9
RUD3	YOR216C	MNN1	P39106	762 aa		3.21	□□□□□ -1.9
RUD3	YOR216C	SDA1	P53313	767 aa	Known RBP	3.21	□□□□□ -1.9
RUD3	YOR216C	ORC1	P54784	914 aa	Predicted RBP	3.21	□□□□□ -1.9
RUD3	YOR216C	MTD1	Q02046	320 aa	Known RBP	3.21	□□□□□ -1.9
RUD3	YOR216C	GET3	Q12154	354 aa	Known RBP	3.21	□□□□□ -1.9
RUD3	YOR216C	Q0010	Q9ZZX9	128 aa		3.21	□□□□□ -1.9
RUD3	YOR216C	RTC1	Q08281	1341 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	YFL068W	P0CX99	160 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	YLL066W-A	P0CY00	160 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	YLL067W-A	P0CY01	160 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	RRP43	P25359	394 aa	Predicted RBP	3.2	□□□□□ -1.9
RUD3	YOR216C	YIL169C	P40442	995 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	CIR1	P42940	261 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	YHM2	Q04013	314 aa		3.2	□□□□□ -1.9
RUD3	YOR216C	RPS21A	P0C0V8	87 aa	Known RBP	3.19	□□□□□ -1.9
RUD3	YOR216C	PRP19	P32523	503 aa	Known RBP	3.19	□□□□□ -1.9
RUD3	YOR216C	YBR139W	P38109	508 aa		3.19	□□□□□ -1.9
RUD3	YOR216C	SLX1	P38324	304 aa		3.19	□□□□□ -1.9
RUD3	YOR216C	HOS2	P53096	452 aa	Predicted RBP	3.19	□□□□□ -1.9
RUD3	YOR216C	ARA2	Q04212	335 aa		3.19	□□□□□ -1.9
RUD3	YOR216C	RAD34	Q06665	692 aa		3.19	□□□□□ -1.9
RUD3	YOR216C	APM4	Q99186	491 aa		3.19	□□□□□ -1.9
RUD3	YOR216C	SEC18	P18759	758 aa	Known RBP	3.18	□□□□□ -1.9
RUD3	YOR216C	YML119W	Q03208	357 aa		3.18	□□□□□ -1.9
RUD3	YOR216C	YOR389W	Q08912	624 aa		3.18	□□□□□ -1.9
RUD3	YOR216C	LYS21	Q12122	440 aa	Known RBP	3.18	□□□□□ -1.9
RUD3	YOR216C	KES1	P35844	434 aa	Known RBP	3.17	□□□□□ -1.9
RUD3	YOR216C	SDH8	P38345	138 aa		3.17	□□□□□ -1.9
RUD3	YOR216C	AMD2	P22580	549 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	DGR2	P32330	852 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	SFP1	P32432	683 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	ERV46	P39727	415 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	COG2	P53271	262 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	SQS1	P53866	767 aa	Known RBP	3.16	□□□□□ -1.9
RUD3	YOR216C	CHO2	P05374	869 aa	Known RBP	3.16	□□□□□ -1.9
RUD3	YOR216C	CNA1	P23287	553 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	HXT4	P32467	576 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	VPS8	P39702	1274 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	VRG4	P40107	337 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	YPT11	P48559	417 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	ECM22	Q05958	814 aa	Predicted RBP	3.16	□□□□□ -1.9
RUD3	YOR216C	RRI1	Q12468	440 aa		3.16	□□□□□ -1.9
RUD3	YOR216C	SEC12	P11655	471 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	RPL8A	P17076	256 aa	Known RBP	3.15	□□□□□ -1.91
RUD3	YOR216C	PPZ1	P26570	692 aa		3.15	□□□□□ -1.91
RUD3	YOR216C	SAP1	P39955	897 aa	Known RBP	3.15	□□□□□ -1.91
RUD3	YOR216C	RAD26	P40352	1085 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms