RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	MPD2	Q99316	277 aa		4.21	□□□□□ -1.74
TPM1	YNL079C	ABF1	P14164	731 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	TUP1	P16649	713 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	FUB1	P25659	250 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	NTH1	P32356	751 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	RMA1	P36001	430 aa	Known RBP	4.2	□□□□□ -1.74
TPM1	YNL079C	YHR097C	P38809	366 aa	Known RBP	4.2	□□□□□ -1.74
TPM1	YNL079C	TMN3	P40071	706 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	ARG2	P40360	574 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	YDL183C	P48569	320 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	CTR1	P49573	406 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	PEF1	P53238	335 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	HLR1	Q04429	423 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	YDL086W	Q07505	273 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	IZH3	Q07959	543 aa		4.2	□□□□□ -1.74
TPM1	YNL079C	YRF1-2	P40105	1681 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	HMG2	P12684	1045 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	MTH1	P35198	433 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	STL1	P39932	569 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	YIL092W	P40497	633 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	YGR151C	P53287	111 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	HEF3	P53978	1044 aa	Known RBP	4.19	□□□□□ -1.74
TPM1	YNL079C	TIM50	Q02776	476 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	YCG1	Q06680	1035 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	AIM41	Q12032	185 aa		4.19	□□□□□ -1.74
TPM1	YNL079C	TY4B-H	P0C2J7	1802 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	TY4B-J	P47024	1803 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	YRF1-4	O13559	1382 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	SIR4	P11978	1358 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	SST2	P11972	698 aa	Known RBP	4.18	□□□□□ -1.74
TPM1	YNL079C	NIC96	P34077	839 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	GLG1	P36143	616 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	UBA2	P52488	636 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	MNT2	P53059	558 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	GND2	P53319	492 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	CNM67	P53865	581 aa	Known RBP	4.18	□□□□□ -1.74
TPM1	YNL079C	SQS1	P53866	767 aa	Known RBP	4.18	□□□□□ -1.74
TPM1	YNL079C	YSH1	Q06224	779 aa	Predicted RBP	4.18	□□□□□ -1.74
TPM1	YNL079C	RTT109	Q07794	436 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	YOL057W	Q08225	711 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	VPS5	Q92331	675 aa		4.18	□□□□□ -1.74
TPM1	YNL079C	HOP1	P20050	605 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	CWH43	P25618	953 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	PRP45	P28004	379 aa	Predicted RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	EHT1	P38295	451 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	KSP1	P38691	1029 aa	Known RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	YJL206C	P39529	758 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	SSP120	P39931	234 aa	Known RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	MAD2	P40958	196 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	CCT7	P42943	550 aa	Known RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	YJR008W	P47085	338 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	NMA2	P53204	395 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	RTK1	Q12100	620 aa	Predicted RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	MRH1	Q12117	320 aa	Predicted RBP	4.17	□□□□□ -1.74
TPM1	YNL079C	TAF3	Q12297	353 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	APC1	P53886	1748 aa		4.17	□□□□□ -1.74
TPM1	YNL079C	RRP5	Q05022	1729 aa	Known RBP	4.16	□□□□□ -1.74
TPM1	YNL079C	TUF1	P02992	437 aa	Known RBP	4.16	□□□□□ -1.74
TPM1	YNL079C	ATP4	P05626	244 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	KIN3	P22209	435 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	ELF1	P36053	145 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	APL3	P38065	1025 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	BDH2	P39713	417 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
TPM1	YNL079C	TAH11	P47112	604 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	DSD1	P53095	428 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	YGR054W	P53235	642 aa	Known RBP	4.16	□□□□□ -1.74
TPM1	YNL079C	DIP5	P53388	608 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	SNF12	P53628	566 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	YNL050C	P53952	270 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	ARR3	Q06598	404 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	IRC10	Q08118	586 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	DIN7	Q12086	430 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	SLM3	Q12093	417 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	RKI1	Q12189	258 aa		4.16	□□□□□ -1.74
TPM1	YNL079C	PHO3	P24031	467 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	KCC4	P25389	1037 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	GMH1	P36125	273 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	PPE1	P38796	400 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	LRO1	P40345	661 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	PUS4	P48567	403 aa	Known RBP	4.15	□□□□□ -1.75
TPM1	YNL079C	YNR071C	P53757	342 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	MET14	Q02196	202 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	UFO1	Q04511	668 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	BMS1	Q08965	1183 aa	Known RBP	4.15	□□□□□ -1.75
TPM1	YNL079C	NUR1	Q12066	484 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	PSF3	Q12146	194 aa		4.15	□□□□□ -1.75
TPM1	YNL079C	YIL177C	P40434	1758 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	YJL225C	P40889	1758 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	GAL1	P04385	528 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	DAL5	P15365	543 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	CDC43	P18898	376 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	HSP104	P31539	908 aa	Known RBP	4.14	□□□□□ -1.75
TPM1	YNL079C	TGL1	P34163	548 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	MRPL7	P36519	292 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	YEL025C	P39991	1188 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	MAM1	P40065	302 aa		4.14	□□□□□ -1.75
TPM1	YNL079C	SCS2	P40075	244 aa	Known RBP	4.14	□□□□□ -1.75
TPM1	YNL079C	ASK10	P48361	1146 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms