RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	COG6	P53959	839 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	SEC5	P89102	971 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	BSP1	Q06604	576 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	YAP7	Q08182	245 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	CRT10	Q08226	957 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
PKR1	YMR123W	RTK1	Q12100	620 aa	Predicted RBP	3.17	□□□□□ -1.9
PKR1	YMR123W	FRE7	Q12333	620 aa		3.17	□□□□□ -1.9
PKR1	YMR123W	URA3	P03962	267 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	YPK1	P12688	680 aa	Known RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	PRP45	P28004	379 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	YJU2	P28320	278 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	PET309	P32522	965 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	BEM3	P32873	1128 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	PSA1	P41940	361 aa	Known RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	BST1	P43571	1029 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	YJR120W	P47157	116 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	BPL1	P48445	690 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	YNR071C	P53757	342 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	YNL092W	P53934	400 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	ECM38	Q05902	660 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	SPN1	Q06505	410 aa	Predicted RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	DIN7	Q12086	430 aa		3.16	□□□□□ -1.9
PKR1	YMR123W	RDL1	Q12305	139 aa	Known RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	SEC3	P33332	1336 aa	Known RBP	3.16	□□□□□ -1.9
PKR1	YMR123W	KAR1	P11927	433 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	MRC1	P25588	1096 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	ENP1	P38333	483 aa	Known RBP	3.15	□□□□□ -1.91
PKR1	YMR123W	RAD26	P40352	1085 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	NMD5	P46970	1048 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	SLX4	Q12098	748 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	PSF3	Q12146	194 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	HOS1	Q12214	470 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	YLR111W	Q12528	110 aa		3.15	□□□□□ -1.91
PKR1	YMR123W	TSR4	P25040	408 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	PLC1	P32383	869 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	GSM1	P42950	618 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	SNO3	P43544	222 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	GAT1	P43574	510 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	SAE2	P46946	345 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	COS12	P53053	380 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	STP1	Q00947	519 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	TRI1	Q05024	226 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	PHM6	Q05637	104 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	HRD3	Q05787	833 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	RGT2	Q12300	763 aa		3.14	□□□□□ -1.91
PKR1	YMR123W	AHA1	Q12449	350 aa	Known RBP	3.14	□□□□□ -1.91
PKR1	YMR123W	CHO2	P05374	869 aa	Known RBP	3.13	□□□□□ -1.91
PKR1	YMR123W	TFC4	P33339	1025 aa		3.13	□□□□□ -1.91
PKR1	YMR123W	RRP8	P38961	392 aa	Known RBP	3.13	□□□□□ -1.91
PKR1	YMR123W	LAS21	P40367	830 aa		3.13	□□□□□ -1.91
PKR1	YMR123W	YIL092W	P40497	633 aa		3.13	□□□□□ -1.91
PKR1	YMR123W	PUS4	P48567	403 aa	Known RBP	3.13	□□□□□ -1.91
PKR1	YMR123W	PEX14	P53112	341 aa		3.13	□□□□□ -1.91
PKR1	YMR123W	ERG13	P54839	491 aa	Known RBP	3.13	□□□□□ -1.91
PKR1	YMR123W	RSC9	Q03124	581 aa		3.13	□□□□□ -1.91
PKR1	YMR123W	GDA1	P32621	518 aa		3.12	□□□□□ -1.91
PKR1	YMR123W	ECM32	P32644	1121 aa	Known RBP	3.12	□□□□□ -1.91
PKR1	YMR123W	MAM1	P40065	302 aa		3.12	□□□□□ -1.91
PKR1	YMR123W	IDP3	P53982	420 aa	Known RBP	3.12	□□□□□ -1.91
PKR1	YMR123W	RAD33	Q04231	177 aa		3.12	□□□□□ -1.91
PKR1	YMR123W	CYK3	Q07533	885 aa		3.12	□□□□□ -1.91
PKR1	YMR123W	DBP10	Q12389	995 aa	Known RBP	3.12	□□□□□ -1.91
PKR1	YMR123W	URE2	P23202	354 aa	Known RBP	3.11	□□□□□ -1.91
PKR1	YMR123W	PHO3	P24031	467 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	TGL1	P34163	548 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	TAF5	P38129	798 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	STB5	P38699	743 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	YLF2	P38746	405 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	IDS2	P46958	469 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	CNM67	P53865	581 aa	Known RBP	3.11	□□□□□ -1.91
PKR1	YMR123W	TRS31	Q03337	283 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	ENT2	Q05785	613 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	PRS5	Q12265	496 aa	Known RBP	3.11	□□□□□ -1.91
PKR1	YMR123W	Q0010	Q9ZZX9	128 aa		3.11	□□□□□ -1.91
PKR1	YMR123W	CET1	O13297	549 aa	Predicted RBP	3.1	□□□□□ -1.91
PKR1	YMR123W	BI2	P03873	423 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	SSB1	P11484	613 aa	Known RBP	3.1	□□□□□ -1.91
PKR1	YMR123W	KGD2	P19262	463 aa	Predicted RBP	3.1	□□□□□ -1.91
PKR1	YMR123W	AMD2	P22580	549 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	YCR061W	P25639	631 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	SDS22	P36047	338 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	VPS8	P39702	1274 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	SCS2	P40075	244 aa	Known RBP	3.1	□□□□□ -1.91
PKR1	YMR123W	SSB2	P40150	613 aa	Known RBP	3.1	□□□□□ -1.91
PKR1	YMR123W	CIR1	P42940	261 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	COG2	P53271	262 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	YNL058C	P53947	316 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	MPS1	P54199	764 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	YML119W	Q03208	357 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	TPO3	Q06451	622 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	GEP3	Q08622	556 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	LCB4	Q12246	624 aa		3.1	□□□□□ -1.91
PKR1	YMR123W	VAS1	P07806	1104 aa	Known RBP	3.09	□□□□□ -1.91
PKR1	YMR123W	KES1	P35844	434 aa	Known RBP	3.09	□□□□□ -1.91
PKR1	YMR123W	SAW1	P39735	261 aa		3.09	□□□□□ -1.91
PKR1	YMR123W	VFA1	P40080	203 aa		3.09	□□□□□ -1.91
PKR1	YMR123W	MNT3	P40549	630 aa		3.09	□□□□□ -1.91
PKR1	YMR123W	FOL1	P53848	824 aa		3.09	□□□□□ -1.91
PKR1	YMR123W	NUR1	Q12066	484 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 2092 ms