RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C EMP65P40085 556 aa3.62□□□□□ -1.83
UBX4YMR067C YIL092WP40497 633 aa3.62□□□□□ -1.83
UBX4YMR067C MNT2P53059 558 aa3.62□□□□□ -1.83
UBX4YMR067C IDP3P53982 420 aaKnown RBP3.62□□□□□ -1.83
UBX4YMR067C TRE2Q08693 809 aa3.62□□□□□ -1.83
UBX4YMR067C PCL8Q08966 492 aa3.62□□□□□ -1.83
UBX4YMR067C YLR111WQ12528 110 aa3.62□□□□□ -1.83
UBX4YMR067C URE2P23202 354 aaKnown RBP3.61□□□□□ -1.83
UBX4YMR067C YJU2P28320 278 aaPredicted RBP3.61□□□□□ -1.83
UBX4YMR067C DAL3P32459 195 aa3.61□□□□□ -1.83
UBX4YMR067C UBP12P39538 1254 aa3.61□□□□□ -1.83
UBX4YMR067C SSP120P39931 234 aaKnown RBP3.61□□□□□ -1.83
UBX4YMR067C MNT3P40549 630 aa3.61□□□□□ -1.83
UBX4YMR067C SAE2P46946 345 aa3.61□□□□□ -1.83
UBX4YMR067C SLD3P53135 668 aa3.61□□□□□ -1.83
UBX4YMR067C HOL1P53389 586 aa3.61□□□□□ -1.83
UBX4YMR067C YNL058CP53947 316 aa3.61□□□□□ -1.83
UBX4YMR067C RSC9Q03124 581 aa3.61□□□□□ -1.83
UBX4YMR067C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
UBX4YMR067C BI2P03873 423 aa3.6□□□□□ -1.83
UBX4YMR067C PRP45P28004 379 aaPredicted RBP3.6□□□□□ -1.83
UBX4YMR067C SPC105P53148 917 aa3.6□□□□□ -1.83
UBX4YMR067C GEP3Q08622 556 aa3.6□□□□□ -1.83
UBX4YMR067C CIR2Q08822 631 aa3.6□□□□□ -1.83
UBX4YMR067C YOR378WQ08902 515 aa3.6□□□□□ -1.83
UBX4YMR067C PRS5Q12265 496 aaKnown RBP3.6□□□□□ -1.83
UBX4YMR067C AHA1Q12449 350 aaKnown RBP3.6□□□□□ -1.83
UBX4YMR067C YPK1P12688 680 aaKnown RBP3.59□□□□□ -1.83
UBX4YMR067C COX11P19516 300 aaKnown RBP3.59□□□□□ -1.83
UBX4YMR067C ARG1P22768 420 aa3.59□□□□□ -1.83
UBX4YMR067C JHD1P40034 492 aa3.59□□□□□ -1.83
UBX4YMR067C PCI8P40512 444 aa3.59□□□□□ -1.83
UBX4YMR067C HRD3Q05787 833 aa3.59□□□□□ -1.83
UBX4YMR067C TPO3Q06451 622 aa3.59□□□□□ -1.83
UBX4YMR067C CYK3Q07533 885 aa3.59□□□□□ -1.83
UBX4YMR067C PEX15Q08215 383 aa3.59□□□□□ -1.83
UBX4YMR067C CWC2Q12046 339 aaPredicted RBP3.59□□□□□ -1.83
UBX4YMR067C CHO2P05374 869 aaKnown RBP3.58□□□□□ -1.84
UBX4YMR067C YUR1P26725 428 aa3.58□□□□□ -1.84
UBX4YMR067C PET309P32522 965 aaPredicted RBP3.58□□□□□ -1.84
UBX4YMR067C STL1P39932 569 aa3.58□□□□□ -1.84
UBX4YMR067C MAM1P40065 302 aa3.58□□□□□ -1.84
UBX4YMR067C LAS21P40367 830 aa3.58□□□□□ -1.84
UBX4YMR067C CIR1P42940 261 aa3.58□□□□□ -1.84
UBX4YMR067C YNL092WP53934 400 aa3.58□□□□□ -1.84
UBX4YMR067C YPL071CQ02864 156 aa3.58□□□□□ -1.84
UBX4YMR067C PSF3Q12146 194 aa3.58□□□□□ -1.84
UBX4YMR067C HOS1Q12214 470 aa3.58□□□□□ -1.84
UBX4YMR067C CRC1Q12289 327 aa3.58□□□□□ -1.84
UBX4YMR067C CET1O13297 549 aaPredicted RBP3.57□□□□□ -1.84
UBX4YMR067C HEM12P32347 362 aaPredicted RBP3.57□□□□□ -1.84
UBX4YMR067C ASK1P35734 292 aa3.57□□□□□ -1.84
UBX4YMR067C YBR071WP38243 211 aa3.57□□□□□ -1.84
UBX4YMR067C EAF5P39995 279 aa3.57□□□□□ -1.84
UBX4YMR067C MAD2P40958 196 aa3.57□□□□□ -1.84
UBX4YMR067C COG2P53271 262 aa3.57□□□□□ -1.84
UBX4YMR067C YNR071CP53757 342 aa3.57□□□□□ -1.84
UBX4YMR067C ENT2Q05785 613 aa3.57□□□□□ -1.84
UBX4YMR067C URA3P03962 267 aa3.56□□□□□ -1.84
UBX4YMR067C KGD2P19262 463 aaPredicted RBP3.56□□□□□ -1.84
UBX4YMR067C PLC1P32383 869 aa3.56□□□□□ -1.84
UBX4YMR067C GDA1P32621 518 aa3.56□□□□□ -1.84
UBX4YMR067C CFD1P40558 293 aa3.56□□□□□ -1.84
UBX4YMR067C GSM1P42950 618 aa3.56□□□□□ -1.84
UBX4YMR067C IRC8P47046 822 aa3.56□□□□□ -1.84
UBX4YMR067C SCS3P53012 380 aa3.56□□□□□ -1.84
UBX4YMR067C COS12P53053 380 aa3.56□□□□□ -1.84
UBX4YMR067C RAD33Q04231 177 aa3.56□□□□□ -1.84
UBX4YMR067C TRI1Q05024 226 aa3.56□□□□□ -1.84
UBX4YMR067C KAR1P11927 433 aa3.55□□□□□ -1.84
UBX4YMR067C YAP1P19880 650 aaKnown RBP3.55□□□□□ -1.84
UBX4YMR067C YEN1P40028 759 aa3.55□□□□□ -1.84
UBX4YMR067C IRC7P43623 340 aa3.55□□□□□ -1.84
UBX4YMR067C SCW4P53334 386 aaKnown RBP3.55□□□□□ -1.84
UBX4YMR067C MRPL1Q04599 285 aa3.55□□□□□ -1.84
UBX4YMR067C DIN7Q12086 430 aa3.55□□□□□ -1.84
UBX4YMR067C SLX4Q12098 748 aa3.55□□□□□ -1.84
UBX4YMR067C RTK1Q12100 620 aaPredicted RBP3.55□□□□□ -1.84
UBX4YMR067C PNO1Q99216 274 aaKnown RBP3.55□□□□□ -1.84
UBX4YMR067C GRX4P32642 244 aa3.54□□□□□ -1.84
UBX4YMR067C TAF5P38129 798 aa3.54□□□□□ -1.84
UBX4YMR067C FTH1P38310 465 aa3.54□□□□□ -1.84
UBX4YMR067C PAF1P38351 445 aa3.54□□□□□ -1.84
UBX4YMR067C NOP2P40991 618 aaKnown RBP3.54□□□□□ -1.84
UBX4YMR067C STB2P46679 850 aa3.54□□□□□ -1.84
UBX4YMR067C IDS2P46958 469 aa3.54□□□□□ -1.84
UBX4YMR067C LCB4Q12246 624 aa3.54□□□□□ -1.84
UBX4YMR067C YPR089WO13585 888 aa3.53□□□□□ -1.84
UBX4YMR067C YMR085WP0CF18 432 aa3.53□□□□□ -1.84
UBX4YMR067C AMD2P22580 549 aa3.53□□□□□ -1.84
UBX4YMR067C MAK32P23060 363 aa3.53□□□□□ -1.84
UBX4YMR067C YCR061WP25639 631 aa3.53□□□□□ -1.84
UBX4YMR067C COQ3P27680 312 aa3.53□□□□□ -1.84
UBX4YMR067C KES1P35844 434 aaKnown RBP3.53□□□□□ -1.84
UBX4YMR067C LNP1P38878 278 aa3.53□□□□□ -1.84
UBX4YMR067C YMR124WP39523 943 aaKnown RBP3.53□□□□□ -1.84
UBX4YMR067C PUS4P48567 403 aaKnown RBP3.53□□□□□ -1.84
UBX4YMR067C COP1P53622 1201 aaKnown RBP3.53□□□□□ -1.84
UBX4YMR067C COG6P53959 839 aa3.53□□□□□ -1.84
UBX4YMR067C ECM38Q05902 660 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms