RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RPC17P47076 161 aa4.02□□□□□ -1.77
USA1YML029W PCL10P53124 433 aa4.02□□□□□ -1.77
USA1YML029W HER2Q03557 464 aa4.02□□□□□ -1.77
USA1YML029W INP2Q03824 705 aa4.02□□□□□ -1.77
USA1YML029W GRX3Q03835 250 aa4.02□□□□□ -1.77
USA1YML029W URH1Q04179 340 aa4.02□□□□□ -1.77
USA1YML029W ATG23Q06671 453 aa4.02□□□□□ -1.77
USA1YML029W YOR059CQ08448 450 aaKnown RBP4.02□□□□□ -1.77
USA1YML029W DDC1Q08949 612 aa4.02□□□□□ -1.77
USA1YML029W SAM3Q08986 587 aa4.02□□□□□ -1.77
USA1YML029W YRR1Q12172 810 aa4.02□□□□□ -1.77
USA1YML029W PDH1Q12428 516 aaKnown RBP4.02□□□□□ -1.77
USA1YML029W ZRT2Q12436 422 aa4.02□□□□□ -1.77
USA1YML029W IZH4Q99393 312 aa4.02□□□□□ -1.77
USA1YML029W REV1P12689 985 aa4.01□□□□□ -1.77
USA1YML029W KAR3P17119 729 aa4.01□□□□□ -1.77
USA1YML029W FPR1P20081 114 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W RPO26P20435 155 aa4.01□□□□□ -1.77
USA1YML029W FSH1P38777 243 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W AIM18P38884 321 aa4.01□□□□□ -1.77
USA1YML029W PRK1P40494 810 aa4.01□□□□□ -1.77
USA1YML029W ASG7P46993 209 aa4.01□□□□□ -1.77
USA1YML029W VTC4P47075 721 aa4.01□□□□□ -1.77
USA1YML029W IMP4P53941 290 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W YNL040WP53960 456 aaPredicted RBP4.01□□□□□ -1.77
USA1YML029W YMR187CQ03236 431 aa4.01□□□□□ -1.77
USA1YML029W AIM41Q12032 185 aa4.01□□□□□ -1.77
USA1YML029W HOS1Q12214 470 aa4.01□□□□□ -1.77
USA1YML029W ARP7Q12406 477 aa4.01□□□□□ -1.77
USA1YML029W PDE1P22434 369 aa4.01□□□□□ -1.77
USA1YML029W CSE1P33307 960 aa4.01□□□□□ -1.77
USA1YML029W HSL7P38274 827 aa4.01□□□□□ -1.77
USA1YML029W CRP1P38845 465 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W EXO1P39875 702 aa4.01□□□□□ -1.77
USA1YML029W RPT2P40327 437 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W UFE1P41834 346 aa4.01□□□□□ -1.77
USA1YML029W FLC3P53121 802 aa4.01□□□□□ -1.77
USA1YML029W ART5P53244 586 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W YTP1P53584 459 aa4.01□□□□□ -1.77
USA1YML029W SUB1P54000 292 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W UFO1Q04511 668 aa4.01□□□□□ -1.77
USA1YML029W TDA9Q04545 1251 aa4.01□□□□□ -1.77
USA1YML029W NUT2Q06213 157 aa4.01□□□□□ -1.77
USA1YML029W YPR084WQ06821 456 aa4.01□□□□□ -1.77
USA1YML029W NOP6Q07623 225 aaKnown RBP4.01□□□□□ -1.77
USA1YML029W NSE1Q07913 336 aa4.01□□□□□ -1.77
USA1YML029W YPQ1Q12010 308 aa4.01□□□□□ -1.77
USA1YML029W NUR1Q12066 484 aa4.01□□□□□ -1.77
USA1YML029W YLL056CQ12177 298 aa4.01□□□□□ -1.77
USA1YML029W EMP46Q12396 444 aa4.01□□□□□ -1.77
USA1YML029W AVL9Q12500 764 aa4.01□□□□□ -1.77
USA1YML029W YDR034W-BQ6Q5X2 51 aa4.01□□□□□ -1.77
USA1YML029W YML002WP0CF17 737 aa4□□□□□ -1.77
USA1YML029W BET2P20133 325 aa4□□□□□ -1.77
USA1YML029W YIH1P25637 258 aa4□□□□□ -1.77
USA1YML029W DAL1P32375 460 aa4□□□□□ -1.77
USA1YML029W DEF1P35732 738 aaKnown RBP4□□□□□ -1.77
USA1YML029W END3P39013 349 aa4□□□□□ -1.77
USA1YML029W HEM14P40012 539 aa4□□□□□ -1.77
USA1YML029W RAD26P40352 1085 aa4□□□□□ -1.77
USA1YML029W RTA1P53047 317 aa4□□□□□ -1.77
USA1YML029W RIM8P53179 542 aa4□□□□□ -1.77
USA1YML029W YPR003CP53394 754 aa4□□□□□ -1.77
USA1YML029W YNL058CP53947 316 aa4□□□□□ -1.77
USA1YML029W RKM2Q03942 479 aa4□□□□□ -1.77
USA1YML029W AAD15Q08361 143 aa4□□□□□ -1.77
USA1YML029W HIS5P07172 385 aa4□□□□□ -1.77
USA1YML029W PPH22P23595 377 aa4□□□□□ -1.77
USA1YML029W HEM12P32347 362 aaPredicted RBP4□□□□□ -1.77
USA1YML029W SEC6P32844 805 aa4□□□□□ -1.77
USA1YML029W DLD2P46681 530 aaKnown RBP4□□□□□ -1.77
USA1YML029W YML6P51998 286 aa4□□□□□ -1.77
USA1YML029W NOG2P53742 486 aaKnown RBP4□□□□□ -1.77
USA1YML029W GCN5Q03330 439 aa4□□□□□ -1.77
USA1YML029W ENT5Q03769 411 aaKnown RBP4□□□□□ -1.77
USA1YML029W FAP7Q12055 197 aaPredicted RBP4□□□□□ -1.77
USA1YML029W YDR018CQ12185 396 aa4□□□□□ -1.77
USA1YML029W LPX1Q12405 387 aaKnown RBP4□□□□□ -1.77
USA1YML029W HIS1P00498 297 aaKnown RBP3.99□□□□□ -1.77
USA1YML029W CDC8P00572 216 aa3.99□□□□□ -1.77
USA1YML029W PEP5P12868 1029 aa3.99□□□□□ -1.77
USA1YML029W SLY1P22213 666 aa3.99□□□□□ -1.77
USA1YML029W MRPL40P36534 297 aa3.99□□□□□ -1.77
USA1YML029W RDH54P38086 958 aa3.99□□□□□ -1.77
USA1YML029W APM3P38153 483 aa3.99□□□□□ -1.77
USA1YML029W OLA1P38219 394 aaKnown RBP3.99□□□□□ -1.77
USA1YML029W DIA4P38705 446 aaPredicted RBP3.99□□□□□ -1.77
USA1YML029W FMO1P38866 432 aa3.99□□□□□ -1.77
USA1YML029W BST1P43571 1029 aa3.99□□□□□ -1.77
USA1YML029W IPI3P53877 555 aa3.99□□□□□ -1.77
USA1YML029W KTR6P54070 446 aa3.99□□□□□ -1.77
USA1YML029W PIR3Q03180 325 aa3.99□□□□□ -1.77
USA1YML029W NRT1Q08485 598 aa3.99□□□□□ -1.77
USA1YML029W SEY1Q99287 776 aa3.99□□□□□ -1.77
USA1YML029W YMR084WA2P2R3 262 aa3.99□□□□□ -1.77
USA1YML029W IMA3P0CW40 589 aa3.99□□□□□ -1.77
USA1YML029W IMA4P0CW41 589 aa3.99□□□□□ -1.77
USA1YML029W MEI4P29467 408 aa3.99□□□□□ -1.77
USA1YML029W LTV1P34078 463 aa3.99□□□□□ -1.77
USA1YML029W DUG2P38149 878 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms