RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W PEX14P53112 341 aa4.5□□□□□ -1.69
SMD2YLR275W PHM6Q05637 104 aa4.5□□□□□ -1.69
SMD2YLR275W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SMD2YLR275W YPK1P12688 680 aaKnown RBP4.49□□□□□ -1.69
SMD2YLR275W MRC1P25588 1096 aa4.49□□□□□ -1.69
SMD2YLR275W APD1P38281 316 aa4.49□□□□□ -1.69
SMD2YLR275W ATP23P53722 227 aa4.49□□□□□ -1.69
SMD2YLR275W YNR071CP53757 342 aa4.49□□□□□ -1.69
SMD2YLR275W PCL8Q08966 492 aa4.49□□□□□ -1.69
SMD2YLR275W DIN7Q12086 430 aa4.49□□□□□ -1.69
SMD2YLR275W SLX4Q12098 748 aa4.49□□□□□ -1.69
SMD2YLR275W PSF3Q12146 194 aa4.49□□□□□ -1.69
SMD2YLR275W CBP3P21560 335 aa4.48□□□□□ -1.69
SMD2YLR275W CDC5P32562 705 aa4.48□□□□□ -1.69
SMD2YLR275W SDH8P38345 138 aa4.48□□□□□ -1.69
SMD2YLR275W TDA10P42938 290 aa4.48□□□□□ -1.69
SMD2YLR275W NET1P47035 1189 aa4.48□□□□□ -1.69
SMD2YLR275W GLO1P50107 326 aa4.48□□□□□ -1.69
SMD2YLR275W CRT10Q08226 957 aa4.48□□□□□ -1.69
SMD2YLR275W SSB1P11484 613 aaKnown RBP4.47□□□□□ -1.69
SMD2YLR275W SSB2P40150 613 aaKnown RBP4.47□□□□□ -1.69
SMD2YLR275W YIL092WP40497 633 aa4.47□□□□□ -1.69
SMD2YLR275W ULP2P40537 1034 aaPredicted RBP4.47□□□□□ -1.69
SMD2YLR275W FOL1P53848 824 aa4.47□□□□□ -1.69
SMD2YLR275W ICT1Q12385 394 aa4.47□□□□□ -1.69
SMD2YLR275W GSY2P27472 705 aa4.46□□□□□ -1.7
SMD2YLR275W BEM3P32873 1128 aa4.46□□□□□ -1.7
SMD2YLR275W STB5P38699 743 aa4.46□□□□□ -1.7
SMD2YLR275W GSM1P42950 618 aa4.46□□□□□ -1.7
SMD2YLR275W COS12P53053 380 aa4.46□□□□□ -1.7
SMD2YLR275W FRE7Q12333 620 aa4.46□□□□□ -1.7
SMD2YLR275W AHA1Q12449 350 aaKnown RBP4.46□□□□□ -1.7
SMD2YLR275W PHO3P24031 467 aa4.45□□□□□ -1.7
SMD2YLR275W TMT1P32643 299 aa4.45□□□□□ -1.7
SMD2YLR275W YNL092WP53934 400 aa4.45□□□□□ -1.7
SMD2YLR275W BSP1Q06604 576 aa4.45□□□□□ -1.7
SMD2YLR275W RDL1Q12305 139 aaKnown RBP4.45□□□□□ -1.7
SMD2YLR275W DBP10Q12389 995 aaKnown RBP4.45□□□□□ -1.7
SMD2YLR275W YJU2P28320 278 aaPredicted RBP4.44□□□□□ -1.7
SMD2YLR275W GDA1P32621 518 aa4.44□□□□□ -1.7
SMD2YLR275W TGL1P34163 548 aa4.44□□□□□ -1.7
SMD2YLR275W PSA1P41940 361 aaKnown RBP4.44□□□□□ -1.7
SMD2YLR275W BST1P43571 1029 aa4.44□□□□□ -1.7
SMD2YLR275W NMD5P46970 1048 aa4.44□□□□□ -1.7
SMD2YLR275W BPL1P48445 690 aaPredicted RBP4.44□□□□□ -1.7
SMD2YLR275W SEC5P89102 971 aa4.44□□□□□ -1.7
SMD2YLR275W TRI1Q05024 226 aa4.44□□□□□ -1.7
SMD2YLR275W YAP7Q08182 245 aa4.44□□□□□ -1.7
SMD2YLR275W NUR1Q12066 484 aa4.44□□□□□ -1.7
SMD2YLR275W PRP45P28004 379 aaPredicted RBP4.43□□□□□ -1.7
SMD2YLR275W TAF5P38129 798 aa4.43□□□□□ -1.7
SMD2YLR275W SCS2P40075 244 aaKnown RBP4.43□□□□□ -1.7
SMD2YLR275W SAE2P46946 345 aa4.43□□□□□ -1.7
SMD2YLR275W IDS2P46958 469 aa4.43□□□□□ -1.7
SMD2YLR275W SPN1Q06505 410 aaPredicted RBP4.43□□□□□ -1.7
SMD2YLR275W VAS1P07806 1104 aaKnown RBP4.42□□□□□ -1.7
SMD2YLR275W SDS22P36047 338 aa4.42□□□□□ -1.7
SMD2YLR275W RRP8P38961 392 aaKnown RBP4.42□□□□□ -1.7
SMD2YLR275W SAW1P39735 261 aa4.42□□□□□ -1.7
SMD2YLR275W VFA1P40080 203 aa4.42□□□□□ -1.7
SMD2YLR275W SNO3P43544 222 aa4.42□□□□□ -1.7
SMD2YLR275W GAT1P43574 510 aa4.42□□□□□ -1.7
SMD2YLR275W PUS4P48567 403 aaKnown RBP4.42□□□□□ -1.7
SMD2YLR275W CNM67P53865 581 aaKnown RBP4.42□□□□□ -1.7
SMD2YLR275W STP1Q00947 519 aa4.42□□□□□ -1.7
SMD2YLR275W RAD33Q04231 177 aa4.42□□□□□ -1.7
SMD2YLR275W ENT2Q05785 613 aa4.42□□□□□ -1.7
SMD2YLR275W HRD3Q05787 833 aa4.42□□□□□ -1.7
SMD2YLR275W CYK3Q07533 885 aa4.42□□□□□ -1.7
SMD2YLR275W YLR111WQ12528 110 aa4.42□□□□□ -1.7
SMD2YLR275W BI2P03873 423 aa4.41□□□□□ -1.7
SMD2YLR275W URE2P23202 354 aaKnown RBP4.41□□□□□ -1.7
SMD2YLR275W MTG2P38860 518 aa4.41□□□□□ -1.7
SMD2YLR275W MAM1P40065 302 aa4.41□□□□□ -1.7
SMD2YLR275W LAS21P40367 830 aa4.41□□□□□ -1.7
SMD2YLR275W COG2P53271 262 aa4.41□□□□□ -1.7
SMD2YLR275W ERG13P54839 491 aaKnown RBP4.41□□□□□ -1.7
SMD2YLR275W RSC9Q03124 581 aa4.41□□□□□ -1.7
SMD2YLR275W YML119WQ03208 357 aa4.41□□□□□ -1.7
SMD2YLR275W TRS31Q03337 283 aa4.41□□□□□ -1.7
SMD2YLR275W PRS5Q12265 496 aaKnown RBP4.41□□□□□ -1.7
SMD2YLR275W CHO2P05374 869 aaKnown RBP4.4□□□□□ -1.71
SMD2YLR275W AMD2P22580 549 aa4.4□□□□□ -1.71
SMD2YLR275W LNP1P38878 278 aa4.4□□□□□ -1.71
SMD2YLR275W RGT2Q12300 763 aa4.4□□□□□ -1.71
SMD2YLR275W CTT1P06115 562 aa4.39□□□□□ -1.71
SMD2YLR275W ADH4P10127 382 aa4.39□□□□□ -1.71
SMD2YLR275W YCR061WP25639 631 aa4.39□□□□□ -1.71
SMD2YLR275W PRE2P30656 287 aaKnown RBP4.39□□□□□ -1.71
SMD2YLR275W YLF2P38746 405 aa4.39□□□□□ -1.71
SMD2YLR275W RAD26P40352 1085 aa4.39□□□□□ -1.71
SMD2YLR275W POL31P46957 487 aa4.39□□□□□ -1.71
SMD2YLR275W YNL034WP53963 612 aa4.39□□□□□ -1.71
SMD2YLR275W IDP3P53982 420 aaKnown RBP4.39□□□□□ -1.71
SMD2YLR275W UBP16Q02863 499 aa4.39□□□□□ -1.71
SMD2YLR275W YPL071CQ02864 156 aa4.39□□□□□ -1.71
SMD2YLR275W TPO3Q06451 622 aa4.39□□□□□ -1.71
SMD2YLR275W PNO1Q99216 274 aaKnown RBP4.39□□□□□ -1.71
SMD2YLR275W RPS7AP26786 190 aaKnown RBP4.38□□□□□ -1.71
SMD2YLR275W SWD1P39706 426 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms